Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0028 |
Symbol | |
ID | 3923484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 45870 |
End bp | 46526 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637895679 |
Product | amino acid ABC transporter permease |
Protein accession | YP_501525 |
Protein GI | 88601347 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCAGA TATCCTTCAT CTTTGACATT ATGGTCCCGG CCTTTGCAAA TGGCCTGCTC ATAACTCTGG CGCTTGTTGC TATTACTGCA CCCATTGGTT TTCTTCTCGG GGTTGGAGTT GCATGCGGGC GGGTGTATGG TGGAAAAGGT CTTTCCTGGC TGATGCACAT ATACACCATA TTTTTCAGGG GTTGCCCATT ATTACTGCTC CTTTTTATTC TGTATTTCGG ACTACCTTCA GTTGGTATTG TTCTGACCCC CTTTGTTGCC TCAGTTCTGG GATTTATATT CTGCAATAGT GCCTATAATT CAGAATATAT CAGAGGCTCA ATATTATCAG TAAAAGAAGG TCAATTAATC GCTGCAAAAG CACTTGGTAT GACAAAGAAT CAGGCTATTT TAAATATTGT ATTACCCCAG GCATTACGTC GGTCAATACC AGGGATTTCG AATGAATTTA TTTATCTTAT AAAATATTCA TCGCTGGCTT ATATGATCAC CGTGATTGAA TTAACCGGTG CAAGCAAGCT TATTGCAACC AAATATTTTG CATACAATGA AACCTTCATC GCCGTTGCGA TTGTGTACCT TCTTCTGGTA ACCATCACAA CGTTCGGGGC AAATGCTTTG GAGAAAAAAT ATGCAATTCC GGGATGA
|
Protein sequence | MDQISFIFDI MVPAFANGLL ITLALVAITA PIGFLLGVGV ACGRVYGGKG LSWLMHIYTI FFRGCPLLLL LFILYFGLPS VGIVLTPFVA SVLGFIFCNS AYNSEYIRGS ILSVKEGQLI AAKALGMTKN QAILNIVLPQ ALRRSIPGIS NEFIYLIKYS SLAYMITVIE LTGASKLIAT KYFAYNETFI AVAIVYLLLV TITTFGANAL EKKYAIPG
|
| |