| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0023 |
|---|
| Symbol | glyA |
|---|
| ID | 3924804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 33312 |
|---|
| End bp | 34622 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637895669 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_501520 |
|---|
| Protein GI | 88601342 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGA AAAATTATCC GGATTTACAA AACCATATTA CCCTTTTATG CCAGATGTGT
ATGCACATGT CCTATCTGGA AACGACTGAT CCAGAAATTG CAGCGATCAT CGATAAAGAA
ACCAACCGTC AGATAAACGG CCTTGAACTT ATTGCTTCAG AGAATGTCGT CAGCAGGGCA
GTCCTTGAAG CTTCCGGTTC AATCATGACG AACAAATACG CAGAAGGGTA TCCGGGTAAA
CGATACTACG GCGGATGTGA GTTCCATGAC ATGGCAGAAA ATCTGGCTCG CGACAGGGTT
TGTTCCCTGT TTGGTGCAGA ACATGCAAAT GTTCAGCCAC ATTCCGGCAG CCAGGCAAAT
ATGGCAGTAT ACTTTACTGT CCTCAAGCCA AGTGACAAGA TCCTTTCCAT GAACCTCTCA
CAGGGTGGCC ATCTCTCCCA TGGGTCACCG GTGAACTTTT CAGGTATTAT CTATGAATCG
CACCAATATG GTGTTGATTT AAAGACAGAG CGGATGGATT ATGGCACGAT CGCCGAGATG
GCACGAACTA TCAAACCGAA GATTATTGTA TGCGGTGCGA GCGCCTACCC AAGAGAGATT
GACTTTAAGG CCTTTGCTGA AATCTCAGAA GAGGTCGGAG CATACTGTGT TGCAGATATT
GCGCATATTG CTGGTCTGTG TGCAACCGGC ATCCACCCAA GCCCGGTCGG TCTGACAACC
TTTACCACTT CAACCACGCA TAAAACACTT CGTGGTCCCC GTGGTGGATT CATCCTCTGT
GACAAGGAGT TTGCAGCACC AATTGACAAA GCAGTATTCC CCGGAATGCA GGGCGGACCC
CTGATGCATA TCATTGCTGC AAAAGCAGTC TGTTTCAAGG AAGCATCCAC AAAAGAGTTC
AAAAAATATT CAGAACAGGT TGTGAAGAAT GCACGGACGA TGGCTGAGAC TTTATCAGCA
AACGGTGTCA GACTTGTATC AGGAGGAACC GACAACCATC TCTGTCTTCT TGACCTGACG
AACTTTGGAA TTACCGGACT TGAGGCGGAA CAAGCTCTTG GAAATGCCGG GATTACCGTA
AACAAGAACA CCATTCCAAA TGAGACCAAG AGCCCCTTTG TCACCAGCGG TCTTCGTGTC
GGAACTCCCG CTGTTACCAG CCGGGGTATG AAGGAGAGTG AAATGAAACA GATCGGAGAA
TGGATTGCAG CAATCATCCG TGACAGCAAG AATACCAGAC TTCAGGAAAC AATCAGGGAA
GAAGTCAAAT CTCTTGCCAG CCAATATCCC CTCTACCCTG ATCTTACATG A
|
|---|
| Protein sequence | MTGKNYPDLQ NHITLLCQMC MHMSYLETTD PEIAAIIDKE TNRQINGLEL IASENVVSRA
VLEASGSIMT NKYAEGYPGK RYYGGCEFHD MAENLARDRV CSLFGAEHAN VQPHSGSQAN
MAVYFTVLKP SDKILSMNLS QGGHLSHGSP VNFSGIIYES HQYGVDLKTE RMDYGTIAEM
ARTIKPKIIV CGASAYPREI DFKAFAEISE EVGAYCVADI AHIAGLCATG IHPSPVGLTT
FTTSTTHKTL RGPRGGFILC DKEFAAPIDK AVFPGMQGGP LMHIIAAKAV CFKEASTKEF
KKYSEQVVKN ARTMAETLSA NGVRLVSGGT DNHLCLLDLT NFGITGLEAE QALGNAGITV
NKNTIPNETK SPFVTSGLRV GTPAVTSRGM KESEMKQIGE WIAAIIRDSK NTRLQETIRE
EVKSLASQYP LYPDLT
|
|---|
| |