| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0010 |
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| Symbol | |
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| ID | 3923930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 15045 |
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| End bp | 17297 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637895659 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_501510 |
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| Protein GI | 88601332 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0248614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTG ATAGAGATGA TTTAGGATTC TGTCAGAATG TTCTGAACGG GGTTGCAACG
CCGGTTATTC AAATAAGTCC TGACAGGACA ATTCAGATGA TCAATGATGC CGCTCTTGAA
ATACTGGCTT TGACCCGTGA GCAGGCTGTT GGTCAGAAAT GCCATGAATT ATTCAGAACC
GACGATTGTG ATGGTGGGGA ATGTGCTACC CTTCGGGCTA TGAGGGAAAA GAGAAAGATT
GAGAGTGAGA CTGTTGCTCA CATACGGGGA AAAGATATCC CCATCCATTA CTATGCCTCT
CCATTGTTCA ATGATTCAGG TGAGGTCATT GGAGCAGTTG AATATTTTGA GAATCTCACT
GAGATCAAGA AAAAGGAAGA TGATTTAAGA CGCGCCGGAA AGGAGATTCA GGGGGTACTC
AATGGTGTTG CAACCCCGGT GATTGCCATT GATATGAGCC AGAAAATTAC TTATATCAAT
AATGCAGGAG CAGACCTCTT TCAGAAAAAA CCGGAAGATT TAATCGGGAC AATTTGCCAT
ACCCTGTTTC AAAATGATGT TTGTCAGGGT GGGAATTGTG CGACCATGCG AAGTATCCGG
GAACGTCGGG TTATCACTGA AGAGACGGTT GCCCACATCG GTTCAAGGGA TATTCCCATA
CTCATCACCG CAACCCCGAT AGTAAATGAT GAGGGGGTAT GTACCGGTGC AGTAGAGTTT
ATTATTGATC TTACCTCTCA AAAAGCAGCA ATCCAGGATG TTCTGACGCT CACCAGGGCC
GCCGTAGAAG GTCGTTTAAA TACCCGTGCA GATGCAAGCA AACATCAGGG TGATTTCCGG
AAGATCGTAG AGGGTGTGAA TGATACTCTG GATGCGGTTA TCGTGCCGCT CAATGTTGCC
GCCGGTTATG TCGATCGTAT CTCGAAAGGT GATATTCCAG AAAAAATCAC TGATACGTAT
TATGGTGATT TCAATACTAT CAAGAATAAT CTGAATCAAT GTATCGACGC AGTCAACGCT
CTGGTTGCCG ATGCAAATAT GCTAAGTAAG GCAGCTGTAG AAGGTCGTTT AAATACCCGT
GCAGATACAA GCAAACATCA GGGTGATTTC CGGAAGATCG TAGAGGGTGT GAATGATACC
CTGGATGCGG TTATTGGTCC CCTGAATGTG GCTGCCAGAT ATGTTGATGA TATATCCAGA
GGTGACATTC CTGCAAAGAT TACTGATAAC TATAATGGTG ATTTCAACAC CATCAAGAAT
AATCTGAATC AATGTATCGA CGCAGTCAAC GCTCTGGTTG CCGATGCAAA TATGCTGAGT
AAGGCAGCTG TAGAAGGTCG TTTAAATACC CGTGCAGATG CAAGCAAACA TCAGGGTGAT
TTCCGGAAGA TCGTAGAGGG TGTGAATGAT ACCCTGGATG CGGTTATTGG TCCCCTGAAT
GTGGCTGCCA GATATGTTGA TGATATATCC AGAGGTGACA TTCCGGCAAA GATTACTGAT
AACTATAATG GTGATTTCAA CACCATCAAG AATAATCTGA ACTCTTGTAT CGACGCTGTC
AACGCTCTGG TTGCCGATGC AAATATGCTG AGTAAGGCAG CTGTAGAAGG TCGTTTAAAT
ACCCGTGCAG ATACAAGCAA ACATCAGGGT GATTTCCGGA AGATCGTAGA GGGTGTGAAT
GATACCCTGG ATGCCGTCAT CGGTCCATTA CATGACATTT CTGCTGTCCT TAAAAGGATG
GCTGTGAATG ACTACTCACA TGGCATAGAA AAGAAATATC TTGGTGATTT TGCACTTGTT
GCATCTGATG TGAATGAAGT GAGGGACCGG GTTAATCATA TCGCAAACTC CATAATTCAA
ATAAGCAACG GAGATCTTTC AGAGTATAAT AATTTTGTAA AAGGTGGGAA GAGGTCTGAT
GAAGATATAC TTGTTCCCGC ATTTATTAAG GTGTATGAAA CCCTTCAGGC ATTACAAAAT
GAATTGATTC GGTTAACCGA AGCTTCAAAA GCGGGAAAAT TATCTGAGCG TGGAAACCCG
GATCAGTTCA AAGGAGCATA TGCTGATGTC ATCCGGGGTA TGAATCAGAT GCTCGATGAG
ATTCTTATCC CTATTGGAGA GGGTAACCGT ATTCTCGAGC AGATTAGGGG TGGAAATCTC
CGTGAAAAAG TAGAGATCGT TTGTCATGGT GATCATGAAA AGATGAAAAA CGCGATAAAT
GGTGTTCATC TTTGGAGGGT GTTGCACCAA TGA
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| Protein sequence | MTFDRDDLGF CQNVLNGVAT PVIQISPDRT IQMINDAALE ILALTREQAV GQKCHELFRT
DDCDGGECAT LRAMREKRKI ESETVAHIRG KDIPIHYYAS PLFNDSGEVI GAVEYFENLT
EIKKKEDDLR RAGKEIQGVL NGVATPVIAI DMSQKITYIN NAGADLFQKK PEDLIGTICH
TLFQNDVCQG GNCATMRSIR ERRVITEETV AHIGSRDIPI LITATPIVND EGVCTGAVEF
IIDLTSQKAA IQDVLTLTRA AVEGRLNTRA DASKHQGDFR KIVEGVNDTL DAVIVPLNVA
AGYVDRISKG DIPEKITDTY YGDFNTIKNN LNQCIDAVNA LVADANMLSK AAVEGRLNTR
ADTSKHQGDF RKIVEGVNDT LDAVIGPLNV AARYVDDISR GDIPAKITDN YNGDFNTIKN
NLNQCIDAVN ALVADANMLS KAAVEGRLNT RADASKHQGD FRKIVEGVND TLDAVIGPLN
VAARYVDDIS RGDIPAKITD NYNGDFNTIK NNLNSCIDAV NALVADANML SKAAVEGRLN
TRADTSKHQG DFRKIVEGVN DTLDAVIGPL HDISAVLKRM AVNDYSHGIE KKYLGDFALV
ASDVNEVRDR VNHIANSIIQ ISNGDLSEYN NFVKGGKRSD EDILVPAFIK VYETLQALQN
ELIRLTEASK AGKLSERGNP DQFKGAYADV IRGMNQMLDE ILIPIGEGNR ILEQIRGGNL
REKVEIVCHG DHEKMKNAIN GVHLWRVLHQ
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