Gene Mhun_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0008 
Symbol 
ID3923928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp11694 
End bp13253 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content46% 
IMG OID637895657 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_501508 
Protein GI88601330 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAG ATGTTCAAAA AGCCTCAGAA AAAGATCAAA TTCATGAATA TTTGATACAA 
CTACGGGATA ATATTAAAGC ATTAGTGGAG GATGCAAATT TACTTTCCAA AGCAGCTGTA
GAAGGTCGTT TAGATACCCG TGCAGATGCC TCCAAACATC AGGGCGATTT CCGGAAGATC
GTTGAGGGTG TGAATGATAC GCTAGACGCG GTTATTGGAC CGCTCAATGT TGCTGCGAGA
TATGTTGATC GTATTTCCAA AGGAGATATT CCGGCAAAGA TCACTGATAA CTATAACGGT
GATTTCAACA CCATCAAGAA TAATCTAAAT GTCTGTATTG ATGCTGTCAA CGCTCTGGTC
GATGATGCAA ATATGCTTTC CAGGGCAGCA CTTGATGGAA AACTTAAAAC ACGTGCAGAT
GCCTCCAAAC ATCAGGGTGA TTTCCGCAAG ATCGTACAAG GAGTCAATGA GACACTGGAC
AGTGTTATCG TCCCGGTGAA CGAAGCCCTT CGCGTTTCCA AAGAATATGC AAATTCCAAC
TTTACTGCAC GGGTGGATCC ATCACTGAAG GTATCAGGTG ACTGGGTAGA ATTTAAAGAC
GCCCTGAACA ATATCGGTAT CCAGATATCG GCAGCTGTGG GTCTTATCAA TAAACAACTT
CTTGACCTTG CCTCCAATGC TGAAGAAGCG ACCGCAAGTA TTGAGGAGGT TTCAGCCGGA
GCACAACAAA TTGCAAAAAA TGCCGGGGAA GTCAGTTCTA ATGCAATACG GGGAGAAGAT
GGTATTCACC AGGTTCTCAA AGCTATGGAA GATCTCAATA CCACCGTTGC TGAAGTATCC
CGCCGTGCCG AGGAGGTATC ATCCACCGCA ACCGCAGCAA ACGGGTATGC AAAGAACGGG
GTTGAACTGG CACAAAAATC TGAGACGGCA ATGGAGGAGA TCAAGCGGTC ATCGTCTGAA
GTTGATCAGA TAGTCAAAGA CATCAATCAG CAGATGGATG AGATCGGTAA AATTGTAAGA
CTCATTTCAG ATATCGCAAA CCAGACCAAC CTTCTTGCCC TGAACGCAGC TATTGAAGCA
GCACGGGCCG GTGAAGCAGG ACGAGGATTT GCGGTAGTTG CAGCTGAAGT CAAATCCCTT
GCCCAGGATT CACGTCAGTC CGCCGAGAAT ATTGCAGATA TGATCATGGC CCTCCAGACA
AAAGCCAAAA AGGCGAATGA TGCCATGGGT CATGCAGGAG AGACTGTTGC CATGGGAAGT
TCTGCCCTTT CAGAAACGCT CGGGGCTTTT GAGCAGATTG CAGCATCCAT TGATGACATC
ACCCGGAACG CAACCGATGT GGCATCATCA TCAGAAGAAC AGGCAGCATC AGTAGAAGAA
GTAACCGCCA GTATTAATGA AGTAAGCGGG CTGGTTCAAA ATACGGCAAA AGAGGCAGGA
GATGCAGCAG CTGCAACCCA GGAAGCTTCG GCGTCTATTG ACCAGATCAG TAAGATAGTT
GCAAATGTGA ATGAGATCGT GGAAATTGTC TCCAGTGAAA TGGCGAAGTT TAAAATTTAG
 
Protein sequence
MTADVQKASE KDQIHEYLIQ LRDNIKALVE DANLLSKAAV EGRLDTRADA SKHQGDFRKI 
VEGVNDTLDA VIGPLNVAAR YVDRISKGDI PAKITDNYNG DFNTIKNNLN VCIDAVNALV
DDANMLSRAA LDGKLKTRAD ASKHQGDFRK IVQGVNETLD SVIVPVNEAL RVSKEYANSN
FTARVDPSLK VSGDWVEFKD ALNNIGIQIS AAVGLINKQL LDLASNAEEA TASIEEVSAG
AQQIAKNAGE VSSNAIRGED GIHQVLKAME DLNTTVAEVS RRAEEVSSTA TAANGYAKNG
VELAQKSETA MEEIKRSSSE VDQIVKDINQ QMDEIGKIVR LISDIANQTN LLALNAAIEA
ARAGEAGRGF AVVAAEVKSL AQDSRQSAEN IADMIMALQT KAKKANDAMG HAGETVAMGS
SALSETLGAF EQIAASIDDI TRNATDVASS SEEQAASVEE VTASINEVSG LVQNTAKEAG
DAAAATQEAS ASIDQISKIV ANVNEIVEIV SSEMAKFKI