| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0006 |
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| Symbol | |
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| ID | 3922951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 9683 |
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| End bp | 10921 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637895655 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_501506 |
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| Protein GI | 88601328 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.533638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACT CAAGGCGCCA GATCCCTACC CCTCTCCCAG ATGCTCCTGA TCAGCATCCT
CTCCAGAAAA AACCCGAATA CACTGAAGAT TACCAGAAAC TCTATAACTC TCTTATCCTT
CAAAATGCTG AAATCTCTGT TTTAAATGAG GAACTCATCG CTCAGCAGGA TGAGCTGCGT
CTCCAGTACC AGCAGCTTGC CCAGGCGGAG TATGAAATCC GTAAGCGTGA GGAACAACTG
CGGTTTATTA CCCGGCAGAT TCCGGCAACT CTCTGGGTTG TTGACAGGGA GCTCAATTAT
CTTCTATCAG AAGGAAAGGG CCTATCCCTT ATTGGTCTTA CCCCCGGAGA AGTTGTCGGA
CAGAATCTTT ATGATTTTTT TCACTCTTCA AAAGGGAATC ACCCGGCAAT AGAGGCGCAT
ATCCGTGCAT TACGCGGAGA AGAAGTAACA TTTGAATATG ATCATAACGG GGTAATCTTC
CAGACCTCGC TCACCCCTAT GACCGGACCG GATCAGATAA TCAACGGCGT TATCGGGATT
GCATATGATA TCACAGAGCA GGTGAAAGCC GCTGAACGGA TCAGGTTTGA ACGGGAACGT
GCACATCAGT ATCTCAACGT TGCAGAGGTG ATGATTCTGG CCTTTGACCG GCATGGCACA
ATCACTCTTA TCAACCGGAG AGGGTGTGAG TTCCTGGGTC TTTCGCATGA TGATATCATT
GGAAAAAACT GGTTTGATCA GTTTCTTCCC CCCTCTGAAT GGGCCCTGAC ACGGCAATTC
TTCCATGAAT TCTTCCAGGG CTGGTATGGA GATTGTTCAC GGTTCAAAGG GGAAATTCTA
ACCAGTGACG GTTCACCCCG GTTCATCTCA TGGTTTATGC ATGCGATTCG CTCTCCTTCT
GGCAAATGCA TCGGAATTCT TGCTTCAGGG AAAGACATCA CCCGGGAACG GCAGCTCGAA
GATGAAAAAA CTGCAGCAGT CAGACAGATA GAGAAGAATA TTGCAAAACT AGCGGTTCTC
AATGACCAGA TCCGCAATCC TCTCAGTATC ATCCTTACGC TGGCAAGTAT GTCTGATGAC
GTGGAATTTG CAGAGAAGAT CAGTGAGCAG GTTGCAAAGA TAGATTCCAT CGTGAATGAT
CTGGATCACC GGTGGATGGA GTCTGATAAG GTCCTCGAGT TTCTTCGAAA ACATCATAAT
TTTAATACAG CGTCCATTAC TGACGGGGAA TCGAAGTAA
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| Protein sequence | MDNSRRQIPT PLPDAPDQHP LQKKPEYTED YQKLYNSLIL QNAEISVLNE ELIAQQDELR
LQYQQLAQAE YEIRKREEQL RFITRQIPAT LWVVDRELNY LLSEGKGLSL IGLTPGEVVG
QNLYDFFHSS KGNHPAIEAH IRALRGEEVT FEYDHNGVIF QTSLTPMTGP DQIINGVIGI
AYDITEQVKA AERIRFERER AHQYLNVAEV MILAFDRHGT ITLINRRGCE FLGLSHDDII
GKNWFDQFLP PSEWALTRQF FHEFFQGWYG DCSRFKGEIL TSDGSPRFIS WFMHAIRSPS
GKCIGILASG KDITRERQLE DEKTAAVRQI EKNIAKLAVL NDQIRNPLSI ILTLASMSDD
VEFAEKISEQ VAKIDSIVND LDHRWMESDK VLEFLRKHHN FNTASITDGE SK
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