Gene Saro_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3290 
Symbol 
ID3915937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3507383 
End bp3508378 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content66% 
IMG OID640446075 
Productbifunctional sulfur carrier protein/thiazole synthase protein 
Protein accessionYP_498559 
Protein GI87201302 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2022] Uncharacterized enzyme of thiazole biosynthesis
[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGAC AGCTATCCCT TACCGTCAAC GGCGAACCCC GCCGCGCCGC GCCCGGATCG 
ATCGCCGACC TGGTGCGCAG CCTGGAACTC GATCCGGCCA AGGTCGCGGT CGAACGCAAT 
GGCGAGATCG TCCCGCGCTC GACCTTGGCC AGCGTGGCGA TCGCCGATGG GGACGTGCTG 
GAAATCGTGC ATTTCGTGGG TGGAGGACAA TCGGACGTGA CCGACAACAA CGATACCTGG 
ACCGTCGCCG GACGCACCTT CACCTCGCGC CTGATCGTGG GCACGGGCAA GTACAAGGAC 
TTCGAGCAGA ACGCCGCCGC GGTCGAAGCA TCGGGCGCGG AGATCGTCAC CGTCGCCGTG 
CGCAGGGTCA ACGTCTCGGA CCCCAAGGCG CCGATGCTGA CCGACTACAT CGACCCGAAG 
AAAATCACCT ACCTGCCCAA CACCGCCGGC TGCTTTACCG CCGAGGACGC GATCCGCACG 
CTGCGCCTTG CGCGCGAGGC GGGCGGCTGG GATCTGGTGA AGCTGGAAGT CCTGGGCGAG 
GCGCGCACGC TCTATCCCAA CATGATCGAA ACGATCCGCG CGACCGAAGT CCTGGCCAAG 
GAAGGCTTCC TGCCAATGGT CTATTGCGTC GACGATCCGA TCGCTGCCAA GCAGCTTGAA 
GACGCGGGCG CGGTCGCCGT CATGCCACTG GGCGCGCCGA TCGGTTCGGG CCTCGGCATC 
CAGAACAAGG TAACGGTGCG GCTGATCGTC GAAGGCGCCA AGGTGCCGGT GCTCGTCGAC 
GCAGGCGTGG GCACCGCTTC CGAAGCCGCC GTGGCGATGG AGCTTGGCTG CGATGGCGTG 
CTGATGAACA CCGCCATCGC CGAGGCCAAG GACCCGATCC GCATGGCCCG CGCAATGAAG 
CTGGCCGTTC AGGCCGGACG CGACGCCTAT CTCGCCGGCC GCATGCCGAC GCGCAAGTAC 
GCCGATCCGT CGAGCCCGCT GGCCGGGTTG ATCTGA
 
Protein sequence
MTGQLSLTVN GEPRRAAPGS IADLVRSLEL DPAKVAVERN GEIVPRSTLA SVAIADGDVL 
EIVHFVGGGQ SDVTDNNDTW TVAGRTFTSR LIVGTGKYKD FEQNAAAVEA SGAEIVTVAV 
RRVNVSDPKA PMLTDYIDPK KITYLPNTAG CFTAEDAIRT LRLAREAGGW DLVKLEVLGE 
ARTLYPNMIE TIRATEVLAK EGFLPMVYCV DDPIAAKQLE DAGAVAVMPL GAPIGSGLGI 
QNKVTVRLIV EGAKVPVLVD AGVGTASEAA VAMELGCDGV LMNTAIAEAK DPIRMARAMK 
LAVQAGRDAY LAGRMPTRKY ADPSSPLAGL I