Gene Saro_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3278 
Symbol 
ID3915925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3497425 
End bp3498555 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content66% 
IMG OID640446063 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_498547 
Protein GI87201290 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.546138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA TCCGCATCAA CGCCGCATTC GATTCCGGCA ACATCGAAGT CCTTGCCACC 
CGGGGCGCGA CGGCCCGACT GGCGATCCGC AAGGACCGGG AATCCGACTT CTTCCAGTGG
TTCCATTTCC GCGTCGACGG CGCGGATGAC CGCGAGCTCG AGCTGAAGAT CACCGGGCTC
GAGGCTTCCG CCTATCCCGG CGGATGGCCT GGCTATCGCG CGGCGGTCTC GCAGGATCGG
GAGATATGGA GCCGCGCCGA ATCGCACTAC GATCCGCGCG AGGACGGGGG CACACTGACG
ATCCGGCACA GGCCCGAGGC GGGACCCTGC TGGTTCGCAT ACTTCGCGCC CTATTCGATG
GAGCGGCACC ACGATCTCGT CGCCGCCACG GCAGGCTGCG ACGGCGTCGA ATACCGGTGC
CTGGGAACGA GCGTCGAGGG CCAGCCAGTC GACTGCCTGG TCATTGGCGA GGGGCCGAAG
CAGGTCTGGC TCTACGCGCG GCAGCATCCC GGCGAATCGA TGGCCGAATG GTGGATGGAA
GGCGCGCTCG ACATGCTGAC CGACCCGGCC GATCCGCATG CGCGGCGGCT GCGCCAACTC
TGCCGGTTCC ACATCGTACC CAATGCCAAT CCCGACGGTT CGTGCCGGGG CCATTTGCGG
ACCAATGCAG TAGGCGTGAA CCTCAACCGC GAATGGCACG AGCCGAGCGC CGCCAGATCG
CCCGAGGTTC TGGCGATCCG CAACGCGATG GACGAGAGCG GCGTGGACTT CGCCATGGAC
GTCCACGGCG ACGAGGCGAT CCCGCACGTG TTCCTCGCGG GGTTCGAGGG CATCCCTTCC
TGGACCGACG AGCTGGGCGA AGGATACGCG CGCTATCGCC GCATCCTCGA ACGACGCACG
CCGGACTTCC AGACGAAGCG CGGTTATCCG GTTGCCGCAC CTGGGCGGGC AAACCTGTCG
ATGTCGACCA ACCAGGTGGC GGAACGCTTC GGCTGCGTGG CGATGACGCT GGAAATGCCG
TTCAAGGACA ACGACGACCT GCCCTGCAAG GCCCAGGGAT GGAGCCCGGA CCGCAGCAAG
CTGCTGGCGC GCGAATGCCT GGCAGCGCTG CTCGAATGGT TACAGGACTG A
 
Protein sequence
MTDIRINAAF DSGNIEVLAT RGATARLAIR KDRESDFFQW FHFRVDGADD RELELKITGL 
EASAYPGGWP GYRAAVSQDR EIWSRAESHY DPREDGGTLT IRHRPEAGPC WFAYFAPYSM
ERHHDLVAAT AGCDGVEYRC LGTSVEGQPV DCLVIGEGPK QVWLYARQHP GESMAEWWME
GALDMLTDPA DPHARRLRQL CRFHIVPNAN PDGSCRGHLR TNAVGVNLNR EWHEPSAARS
PEVLAIRNAM DESGVDFAMD VHGDEAIPHV FLAGFEGIPS WTDELGEGYA RYRRILERRT
PDFQTKRGYP VAAPGRANLS MSTNQVAERF GCVAMTLEMP FKDNDDLPCK AQGWSPDRSK
LLARECLAAL LEWLQD