Gene Saro_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3275 
Symbol 
ID3915922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3494893 
End bp3495894 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID640446060 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_498544 
Protein GI87201287 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.768237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGGG TTCCCGTGCT CGTGACCGGC GGCGCCGGCT ATATCGGCAG CCATGCCGTC 
CTCGCGCTCA AGGATGCGGG TTGGGCCGTG TCGGTGATCG ACAACCTTAC CACCGGCTTT
CGCTTTGCCG TGCCCGAGGG CGTGCCGTTC TATGAAGGCG ACATCGAGGA TGCCGGGCTT
CTGGCCCGGA TCATCGCGGA ACAGGGCATC AAGGCAGTCA TGCACTTCGC CGGCTCCATT
ATCGTGCCGG AATCGGTCGA AAACCCGCTG AAGTACTATC ACAACAACAC GGCCAAGAGC
CGCGCGCTGA TCGAGGCGGC GGTGAAGGGT GGCGTGCCGC ACTTCATCTT CTCGTCCACC
GCTGCCACCT ATGGCATTCC CGAAGTCTCG CCGGTGACGG AGGACAGCCC GCGTCGTCCG
ATCAATCCCT ATGGCATGTC GAAGCTGATG ACCGAGACCA TGCTGGCCGA CGTCGCCGCA
GCGCACCCGC TGAATTTCTG TGTCCTGCGA TATTTCAACG TTGCGGGGGC CGATCCCCAG
GCGCGCACCG GGCAGTCAAC GGCGGGCGCG ACGCATCTCA TCAAGGTCGC GGTCGAGGCC
GCGCTGGGCA AGCGTGCATC GGTCGGTGTC TACGGAACCG ACTATGCAAC GCCAGATGGC
ACCGGCGTGC GCGATTACAT CCATGTCTCC GATCTTGCCG CCGCGCATGT TCTCGCGCTG
GAGGCGCTGA TCGCCGCGCC CGACGAATCG CTCACTATGA ACTGTGGCTA TGGCCGTGGC
TTTTCGGTCC TTGAAGTGCT CGATGCGGTG GACCGGGTCA CCAACCGCAG AATCGCGCGC
GAAATGCAGG GGCGGCGGGC CGGCGATCCC GATTCGCTGA TCTCGGACAA CCGTCGCATC
AGGTCGACCC TGCCGTGGGT GCCGCAATAT GCCGACCTCG ACACCATCGT TGCCCATGCC
CTGGCGTGGG AGCGCAAGCT GGACGGGATT CGCGGTCAGT AA
 
Protein sequence
MTRVPVLVTG GAGYIGSHAV LALKDAGWAV SVIDNLTTGF RFAVPEGVPF YEGDIEDAGL 
LARIIAEQGI KAVMHFAGSI IVPESVENPL KYYHNNTAKS RALIEAAVKG GVPHFIFSST
AATYGIPEVS PVTEDSPRRP INPYGMSKLM TETMLADVAA AHPLNFCVLR YFNVAGADPQ
ARTGQSTAGA THLIKVAVEA ALGKRASVGV YGTDYATPDG TGVRDYIHVS DLAAAHVLAL
EALIAAPDES LTMNCGYGRG FSVLEVLDAV DRVTNRRIAR EMQGRRAGDP DSLISDNRRI
RSTLPWVPQY ADLDTIVAHA LAWERKLDGI RGQ