Gene Saro_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3255 
Symbol 
ID3917513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3475038 
End bp3476342 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content66% 
IMG OID640446039 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_498524 
Protein GI87201267 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.564317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG CGATGGTGGG TTCGGGCTAC GTCGGCCTCG TGTCGGGCGC CTGCTTTGCC 
GACTTCGGCC ACGACGTGGT CTGCATCGAC AAGGACGAGG GCAAGATCGA GAGCCTGCGC
CAGGGCGTGA TGCCGATCTA CGAGCCGGGT CTTGCCGAAC TGGTCGCCGC CAACGTCAAG
GCTGGTCGTC TCTCGTTCTC GACCGACCTT GCCGCTTCGA TCGAGGATGC GCAGGCGATC
TTCATCGCGG TGGGCACGCC TTCGCGTCGC GGCGACGGCC ACGCCGACTT GAGCTATGTC
TACGCCGTCG CGCAGGAACT GGCAGAGAAC CTGAAGACCC CGGCCGTCAT CGTCACCAAG
TCGACCGTGC CGGTCGGCAC CGGCGACGAG GTGGAGCGGA TCATCCGCGA GAGCGGGACT
GCGGTGCGTT TCGAGGTCGT CTCCAATCCC GAATTCCTGC GCGAAGGCGC CGCCATCGGT
GACTTCAAGC GCCCCGACCG CATTGTCATC GGCGCGGAGG ACGAATGGGC GCAGGGGGTG
ATGAAGGAAG TCTACCGTCC GCTCTTCCTG AACCGCGCGC CAATCCTGTT CACGTCGCGC
CGCAGCAGCG AGCTGATCAA GTACGCCGCC AACGCGTTCC TCGCGACCAA GATCACTTTC
ATCAACGAAA TGGCGGACCT GTGCGAGAAG GTGGGCGCGG ACGTGCAGGA CGTGTCGCGC
GGGATCGGGC TCGACAACCG CATCGGCGCG AAGTTCCTGC ATGCGGGGCC AGGATATGGC
GGTTCGTGCT TCCCCAAGGA CACGCTGGCC CTGCTGAAGA CCGCCGAGGA CTACAACAGC
CCGGTCCGGC TGGTGGAGGC CGTGGTCAAG GTCAACGACA GCCGCAAGCG TGCCATGGGC
CGCAAGGCCA TCGAGGCGCT GGGAGGCGAG GCGCGGGGCA AGCGCGTCGC GCTGCTCGGC
CTGACCTTCA AGCCCAACAC CGATGACATG CGCGATGCGC CCTCGATCGC CATCGTGCAG
ACCTTGCTTG ATGCCGGGGC GGAAGTCGTC GCCTATGACC CCGAAGGCAT GGAAGCAGCC
GCCGCGATTA TGCCGGAAGT GACGATGGCG CCAAACGCCT ATGCCGCGAT CGAAGGCGCC
GATGCGATCG TGCTGGTGAC CGAATGGGAC GCCTTCCGCG CGCTAGACTT CGCGCGGATC
AGGCGCCTGG CCAATGCTCC GGTCATGGTC GACCTGCGCA ATGTCTATGA TCCGGCCGAA
GTGCGCGCGG CCGGCTTCGA ATATACCAGC GTCGGCCGGC CCTGA
 
Protein sequence
MKIAMVGSGY VGLVSGACFA DFGHDVVCID KDEGKIESLR QGVMPIYEPG LAELVAANVK 
AGRLSFSTDL AASIEDAQAI FIAVGTPSRR GDGHADLSYV YAVAQELAEN LKTPAVIVTK
STVPVGTGDE VERIIRESGT AVRFEVVSNP EFLREGAAIG DFKRPDRIVI GAEDEWAQGV
MKEVYRPLFL NRAPILFTSR RSSELIKYAA NAFLATKITF INEMADLCEK VGADVQDVSR
GIGLDNRIGA KFLHAGPGYG GSCFPKDTLA LLKTAEDYNS PVRLVEAVVK VNDSRKRAMG
RKAIEALGGE ARGKRVALLG LTFKPNTDDM RDAPSIAIVQ TLLDAGAEVV AYDPEGMEAA
AAIMPEVTMA PNAYAAIEGA DAIVLVTEWD AFRALDFARI RRLANAPVMV DLRNVYDPAE
VRAAGFEYTS VGRP