Gene Saro_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3250 
Symbol 
ID3917508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3470383 
End bp3471027 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID640446034 
Producthypothetical protein 
Protein accessionYP_498519 
Protein GI87201262 
COG category[S] Function unknown 
COG ID[COG5375] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCC AGGCTGACAT GATCCGTACG CAGCGTCGCG GCTTCGCGGC GCCCGGCGGT 
TTCCATGACC GGCTGGTCCA TTTCCTGGCC CGCGCCTTGC CGGCCGCCGT GGGCGCGCTG
CTGGCGATCA TGATCATCGC GCCGCTTTCG CCGCGCGGGG AGATCAGCTT CCTGCTCGAC
CGCCGCAAGG TGGCGGTGCT GGAAGACCGC ATGCAGGTGT CGAGCGCGAT GTATCGCGGG
CAGGATGACC AGGGGCGCAA TTTCTCGATC ACGGCGGGTT CGGCCGTGCA GCGCACCAAG
GCGACGCAGA TGATCCAGCT CGACCAGCTC ACCGCGCGGA TCATGCTCGA CGACGGGCCG
GCGCTGCTGA CGGCAGCCAA GGGCAACTAC GATTTCGGCC GGGAGATCGT CGACATCGTG
GGGCCGATCA ACTTCCAGAC TTCCGACGGC TATCGCATGA CCGCAACCAA CGTGGACATC
GACCTTGGCG GCAAGCGGCT GAAGAGCCGC GGGCCGGTCG AGGGCAGGAT TCCCGCCGGA
ACATTCTCCG CCGACCGGAT AAGCGCCGAC CTTTCGGCCC GGTCTGTCAC GCTCGAAGGA
AACGCCCGGC TTCGCATGGT GCCCGGCAGG ATGCAGATGC CATGA
 
Protein sequence
MTVQADMIRT QRRGFAAPGG FHDRLVHFLA RALPAAVGAL LAIMIIAPLS PRGEISFLLD 
RRKVAVLEDR MQVSSAMYRG QDDQGRNFSI TAGSAVQRTK ATQMIQLDQL TARIMLDDGP
ALLTAAKGNY DFGREIVDIV GPINFQTSDG YRMTATNVDI DLGGKRLKSR GPVEGRIPAG
TFSADRISAD LSARSVTLEG NARLRMVPGR MQMP