Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3218 |
Symbol | |
ID | 3917476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3435376 |
End bp | 3436779 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640446002 |
Product | sugar transferase |
Protein accession | YP_498487 |
Protein GI | 87201230 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGGC ACATGCCCAT CAGCGAGACG CAGGACGCGC CTCCGCGCCG CCGCATCACG CTACCGCTCG CCCCGCCTCT CGAACAGCGG CGCCTGCAGC TCTACATTGC ACTGCTGCTG CTTGACGGCG CGGCGATCCT CAACGGCTTC TGCATCGCAA GCTGGCTCTA TCTGGGTCGC TTCCTCGATG AGACTTCGCT GCTGCACAGC CAGGTCATGC TGCCGATCTA CTGGTCGATC GCATTGTCGC TGCAAGTCTA CACCCTGACT GCACTGCGGC GTCCGAATTT CGCCCGCGCC CGCGCTGGCC TCTCGCTCAT CGGCGCCGAA ACCGTGCTGC TCTTCGTCGG CTTTGCAACC AAGAGCACCG ACAATTTTTC GCGCGTGTCA TCCTTGCTGG GTCTGGGCCT GAGCCTCGTC TTGCTAATGT GGGTCCGCGC CCTTGTCCGC CCGCTGATCA AGGCGCGTTG CGGCGATGCG GTTACGAATA CCCTGCTGAT CGATGACGGC GGGACGCCGC TGCGGATTCC CCACGCCTAT CACATTGACG CGCGGGAACA TCACCTGGCC CCCGATCTGT CGGACCCGCA CATGATGGAC CGGCTCGGGC TTTACATGAT GAACATGGAC CGGGTCATGG TAAGTTGCCC CCACGATCGC CGGGCCGCGT GGGCACTCGT ATTCAAGAGC GCGAATGTCT CGGGCGAGAT CGTGGACCCG GAAGTGAACA TGCTTGGCGT ACTGGGTGCA AGGCGCGAAC GCGGCTACGG CGCGCTGATC GTGGCAAGCG GCCCGCTGGG CCTGCGCGCC CGCGCGGTCA AGCGCTTGCT CGACCTTGCG CTCGCAGGTG GCGCGGTTCT GGCGCTCGGG CCAGTGCTGC TCCTGGTGGC GGTGCTGATC AAGCTGGAGG ACGGAGGCCC CGTGCTGTTC ATCCAGAAGC GCACGGGGCG GGGTAACCGC TTCTTCCCGA TCTTCAAGTT CCGGTCGATG CGCGTGGAAC GCCTCGATTC AACGGGCTCG CGCTCGGCAA GCAAGGACGA TGACCGTATC ACGCGGATCG GACGCTTCAT ACGAAGCACG AGCATCGACG AGTTGCCGCA GCTGTTCAAC GTGCTGCGCG GAGAAATGTC CATCGTCGGC CCACGCCCGC ACGCCATCGG TTCGCTTGCC GGCGAGAAAC TATTCTGGGA AGTGGACCAC CGCTACTGGC TGCGTCATTC GCTGAAACCC GGCCTTACCG GCCTGGCCCA GGTGCGCGGC CTTCGCGGTG CGACCGACAC CGAGACGGAC CTTGCCAACC GTCTGCAGGC CGATCTCGAA TACCTCGACG GGTGGACGAT CTGGCGCGAC CTCAAGATCA TCGTCAACAC TGCGCGCGTG CTCGTGCACG ACCGAGCCTT CTGA
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Protein sequence | MTRHMPISET QDAPPRRRIT LPLAPPLEQR RLQLYIALLL LDGAAILNGF CIASWLYLGR FLDETSLLHS QVMLPIYWSI ALSLQVYTLT ALRRPNFARA RAGLSLIGAE TVLLFVGFAT KSTDNFSRVS SLLGLGLSLV LLMWVRALVR PLIKARCGDA VTNTLLIDDG GTPLRIPHAY HIDAREHHLA PDLSDPHMMD RLGLYMMNMD RVMVSCPHDR RAAWALVFKS ANVSGEIVDP EVNMLGVLGA RRERGYGALI VASGPLGLRA RAVKRLLDLA LAGGAVLALG PVLLLVAVLI KLEDGGPVLF IQKRTGRGNR FFPIFKFRSM RVERLDSTGS RSASKDDDRI TRIGRFIRST SIDELPQLFN VLRGEMSIVG PRPHAIGSLA GEKLFWEVDH RYWLRHSLKP GLTGLAQVRG LRGATDTETD LANRLQADLE YLDGWTIWRD LKIIVNTARV LVHDRAF
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