Gene Saro_3189 details

Gene Information

• Locus tag: Saro_3189
• ID: 3917447
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 3408868
• End bp: 3409554
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640445973
• Product: outer membrane lipoprotein carrier protein LolA
• Protein accession: YP_498458
• Protein GI: 87201201
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGA TGATCCAATC GATTCGCATG ACGGCCAAGC CCCTTGGCCT CAAAGGGCCC 
GTTGCGGCCC TTTCGCTTGC CCTCGGCACG ACCGGCGCGG TCATCGCGCC CCTGGCCCCG 
CTTGCCGCGC AGGCTTCCCC TTCATCCGAC GTCGACCGCG CCGTCACGGC CCTGCGGAGC 
GTTTCCACGC TGCGCGCGAA CTTCGTGCAG ACCGACCGCT CGGGTCAGAG CGTGTCCGGC 
GTGCTGACGC TGAAGCGCCC CGGCAAGATC CGCTTCCAGT ACCAGAAGGG CGTGCCGCTG 
CTGATCGTGG GCGATGGCAA GGCGCTGACC ATGATCGACT ACGAAGTGCG CCAGGTCCAG 
CGCTGGCCGA TCAGGAACAG CCCGCTGGGT GCCCTGCTCG ATCCGAGCAA GGACGTGGCC 
CGCTTCGCCA AGCAGCTTCC CACGAACGAC CGCGACGTGG TGAGCCTGCA GGTGCGCGAT 
CCCAAGCATC CCGAATACGG CACCATCACG ATGATCTTCG TGCGTAACGG CGCCGCCCCC 
GGTGGCCTCC AGCTCGATTC GTGGGTGGCG CTCGATTCGC AGAACAAGCG CACCACCGTC 
CGGCTTTCGG GTCACCAGTA CGGCGTGGCC GTGGACGACA AGACCTTCCG CTGGACCGAC 
CCGCGCCGCA CCGCTCCGGG CCGCTGA 

 

Protein sequence

MNKMIQSIRM TAKPLGLKGP VAALSLALGT TGAVIAPLAP LAAQASPSSD VDRAVTALRS 
VSTLRANFVQ TDRSGQSVSG VLTLKRPGKI RFQYQKGVPL LIVGDGKALT MIDYEVRQVQ 
RWPIRNSPLG ALLDPSKDVA RFAKQLPTND RDVVSLQVRD PKHPEYGTIT MIFVRNGAAP 
GGLQLDSWVA LDSQNKRTTV RLSGHQYGVA VDDKTFRWTD PRRTAPGR