Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3142 |
Symbol | |
ID | 3918184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3352715 |
End bp | 3353518 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640445926 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_498411 |
Protein GI | 87201154 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.11906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTTTTG ACAGAGGGCG GCGGGGTCGC GGTAGAGACA AGCGCGACGG ATTCGGCGAC GAAGGCGGTT TCGATCCCTA CGGCGGTGGC GGCTTTGGCG GCGGCGGTTA CGACCGCGGC GGTTTTGGCG GCGGTGACCG CGGTGGCTTC GGTGGCGGTG GTCGCGGCGG CTTCGGCGGC GGTGACCGCG GTGGCTTCGG CGGCGGCGAC CGCGGCGGCT TTGGCGGCGG CGATCGTGGC GGCTTCGGCG GCGGCGGCGG TGGTCGCGGC GGCTTCGGCG GCCCGCGTGG CGGCGGCGGC GGTGGCGGCA TGCCCGCCCA GGTTGTCGGC ACCGGCAAGG GTGTCGTAAA GTTCTTCAAC GGCCAGAAGG GTTTCGGCTT CATCCAGCGT GAAGACGGCG GTGAGGACGT GTTCGTCCAC ATCAGCGCGG TCGAGCGTGC GGGCCTTGAA GGCCTGGCGG AAGGCCAGCA GCTCGAATTC AACCTCGTCG ATCGCGGCGG GAAGATTTCG GCTGCCGATC TCCAGGTCGT TGGCGACGTG ATCCCGGTTG CGGCAAAGCC CGCTTCGCCG CAGCGCGAGC TGACCGGCGA GAAGGCCAGC GGCACGGTCA AGTTCTTCAA CGCGATGAAG GGCTTCGGCT TCATCACGCG TGACGACGGC CAGCCCGACG CTTTCGTGCA CATCAGCGCG GTTGAGCGTT CCGGCCTGCG CGAGCTGAAC GAAGGCGACA AGCTCGAGTT CGACCTCGAG GTCGATCGAC GAGGCAAGTA CTCGGCGGTC AACCTGGTGC CGCGTCAGGA CTGA
|
Protein sequence | MGFDRGRRGR GRDKRDGFGD EGGFDPYGGG GFGGGGYDRG GFGGGDRGGF GGGGRGGFGG GDRGGFGGGD RGGFGGGDRG GFGGGGGGRG GFGGPRGGGG GGGMPAQVVG TGKGVVKFFN GQKGFGFIQR EDGGEDVFVH ISAVERAGLE GLAEGQQLEF NLVDRGGKIS AADLQVVGDV IPVAAKPASP QRELTGEKAS GTVKFFNAMK GFGFITRDDG QPDAFVHISA VERSGLRELN EGDKLEFDLE VDRRGKYSAV NLVPRQD
|
| |