Gene Saro_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3142 
Symbol 
ID3918184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3352715 
End bp3353518 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID640445926 
Productcold-shock DNA-binding protein family protein 
Protein accessionYP_498411 
Protein GI87201154 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.11906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTG ACAGAGGGCG GCGGGGTCGC GGTAGAGACA AGCGCGACGG ATTCGGCGAC 
GAAGGCGGTT TCGATCCCTA CGGCGGTGGC GGCTTTGGCG GCGGCGGTTA CGACCGCGGC
GGTTTTGGCG GCGGTGACCG CGGTGGCTTC GGTGGCGGTG GTCGCGGCGG CTTCGGCGGC
GGTGACCGCG GTGGCTTCGG CGGCGGCGAC CGCGGCGGCT TTGGCGGCGG CGATCGTGGC
GGCTTCGGCG GCGGCGGCGG TGGTCGCGGC GGCTTCGGCG GCCCGCGTGG CGGCGGCGGC
GGTGGCGGCA TGCCCGCCCA GGTTGTCGGC ACCGGCAAGG GTGTCGTAAA GTTCTTCAAC
GGCCAGAAGG GTTTCGGCTT CATCCAGCGT GAAGACGGCG GTGAGGACGT GTTCGTCCAC
ATCAGCGCGG TCGAGCGTGC GGGCCTTGAA GGCCTGGCGG AAGGCCAGCA GCTCGAATTC
AACCTCGTCG ATCGCGGCGG GAAGATTTCG GCTGCCGATC TCCAGGTCGT TGGCGACGTG
ATCCCGGTTG CGGCAAAGCC CGCTTCGCCG CAGCGCGAGC TGACCGGCGA GAAGGCCAGC
GGCACGGTCA AGTTCTTCAA CGCGATGAAG GGCTTCGGCT TCATCACGCG TGACGACGGC
CAGCCCGACG CTTTCGTGCA CATCAGCGCG GTTGAGCGTT CCGGCCTGCG CGAGCTGAAC
GAAGGCGACA AGCTCGAGTT CGACCTCGAG GTCGATCGAC GAGGCAAGTA CTCGGCGGTC
AACCTGGTGC CGCGTCAGGA CTGA
 
Protein sequence
MGFDRGRRGR GRDKRDGFGD EGGFDPYGGG GFGGGGYDRG GFGGGDRGGF GGGGRGGFGG 
GDRGGFGGGD RGGFGGGDRG GFGGGGGGRG GFGGPRGGGG GGGMPAQVVG TGKGVVKFFN
GQKGFGFIQR EDGGEDVFVH ISAVERAGLE GLAEGQQLEF NLVDRGGKIS AADLQVVGDV
IPVAAKPASP QRELTGEKAS GTVKFFNAMK GFGFITRDDG QPDAFVHISA VERSGLRELN
EGDKLEFDLE VDRRGKYSAV NLVPRQD