Gene Saro_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3082 
Symbol 
ID3916697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3301191 
End bp3302078 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID640445865 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_498351 
Protein GI87201094 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGGA TGCTGGTCGC GGGCCTTGCC CTGCTGCTGT CGGGGGCCTG TGCGCCGCTG 
GCCGACACCG GGCTCGCGAG CGCGCCCACC GCGCGCTCCG TCACCGCGCT TTCGCAGCAT
TCGCTTCACC TCGCGAGCGC GCCCAACTTC CGTGACATCG GCGGGTACCG TACGCAGGAC
GGTCGACTCG TGCGTCAGGG TATCGCCTAC CGCTCCGACC AGCTCGACCG GCTTGGCGAC
GCCGACCTTG CAGCGATCGC CAGTTTGCGT CCCTCGGTGG TGGTCGACCT TCGCACCAAG
ACGGAGCGGG ACCGCGAACC CGATCGGGTG CCTGCCGGCG CGCGCCACCT CGTTCTCGAT
GTCGCCGCCG ACAGCACCCA GTCGCTCGGC GGCGACATGC GACAGGCCAT GGCGCAGATC
GCCAGCGGAC AGGGCGAAGC GTTGCTGGTC GACGCCAATC GCGAATTCGT GACCCTACCC
AGCGCGCGGC GATCCTATGC CACGCTGATC CGGCTGATGC TCGATTCCGA TGGTCCGGTG
GTGTTCCACT GCACTGCCGG CAAGGACCGC ACCGGCTGGG CGACGGCTGT CGTCCTCACC
CTGCTCGGCG TACCGCGCGC AACGGTGATG GAGGACTATC TGCTCAGCAA TGCAAGGCTC
GCCGACAAGA ACCGGGCCAC CCTTGCAGCG CTGGCGCGAT CGGGCAGCGG GATAGACCCG
GCCTATCTCC AGCCGGTCCT GACCGTACAG CCTCGCTACA TCGAGGCGGC ATTCGACGAG
GTCGACCACG CCTACGGCTC GTTCGACAAC TACGCCCGTG CGGGCCTTGG CCTTTCCGAC
GCGGAACTCC AGCGCCTGCG AGCCAGGTTC CTGACCCGCG CCCGTTAA
 
Protein sequence
MKRMLVAGLA LLLSGACAPL ADTGLASAPT ARSVTALSQH SLHLASAPNF RDIGGYRTQD 
GRLVRQGIAY RSDQLDRLGD ADLAAIASLR PSVVVDLRTK TERDREPDRV PAGARHLVLD
VAADSTQSLG GDMRQAMAQI ASGQGEALLV DANREFVTLP SARRSYATLI RLMLDSDGPV
VFHCTAGKDR TGWATAVVLT LLGVPRATVM EDYLLSNARL ADKNRATLAA LARSGSGIDP
AYLQPVLTVQ PRYIEAAFDE VDHAYGSFDN YARAGLGLSD AELQRLRARF LTRAR