| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3060 |
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| Symbol | |
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| ID | 3916674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3277719 |
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| End bp | 3279596 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640445842 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_498329 |
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| Protein GI | 87201072 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTTG CCCGTTCCGT GTGGAAGATC CTCGTCGCCA TCAAGGACGG TCTCGTCCTC
CTGTTCCTGC TGCTGTTCTT TGCGGGCCTA TATGCCGTGC TCGCGATGCG CCCCGCGCCC
GGCATGGTGC GCGAAGGGGC GCTCTACCTG CCGCTCGAAG GCCGCGTAGT GGAAGAGGCG
ACCGAAATCT CGCCCGCCGA CTTCCTGACC GGCCAGACCC CGGCGCCGGA ATATGTCGAA
CGCGACCTGA CCCGTGCGAT CGAGGCTGCC GCCACGGACA AGCGCATCAA GGCCGTGGTA
CTCGATCTCG AATCCTTCGG CGGCGGCTCT GCCGTCCATC TTTCAAGCAT CGGCGCCGCG
ATGGACAGGG TCCGCGCCGC CAGGAAGCCG GTCTTCGTTC GCTCGCTCAT CTATACCGAC
GATGCGATGC AACTGGCCGC ACATGCGTCG GAAGCGTGGG TCGATCCGAT GGGCGGCGTC
GCGATCACCG GGCCGGGCGG CACGATGCTG TTCTATAAGG GGCTGATCGA CAAGCTGAAG
GCCAACGTCC ACATCTTCAA GGTCGGCACC TACAAGAGCG CGGTCGAACC CTACATGCGC
GCGCAATCCT CGCCCGAGGC GCGCGAGGCG ATGCAGGCGG TCTATGGCGC GATCTGGCAG
AACTGGCAGG ACGAAGTGCG CAAGGCCCGG CCCAAGGCCG ACCTTGCCCT CGCGACGACC
GACCCGGCGA AGTGGGTCGC AGACAATGGC GGCGATGCCG CGCAGGCCGC GCTGAAATCC
GGCCTCATCG ACCGCGTCGG TGACCGCATC GCTTTCGGTA AGCGCGTGGC CGAGGTTGTC
GGCGCGGACG ATCAGGGACC GCTGGGTTCG TTCAAGGCGA CCGAGCTTCC TGTCTATCTG
GCCGACAAGC CCGCCGCCAA GGACGGCAGT GCTATCGCGG TGGTGACCGT GGCCGGCGAG
ATCGTCGATG GTGATGCCGG ACCCGGCGTT GCGGGCGGCG ACCGTATCGC GGACCTCATC
GACGGCGTGA CACAGGCCGA CGACTACGCC GGCCTCGTGC TGCGCGTCGA TTCGCCCGGC
GGCTCGGTCA TGGCCTCGGA ACGCATCCGG GCGGCGGTGG AGCGGGTCAG GGCCAAGGGC
CTGCCGGTGG CGGTTTCGAT GGGCAGCGTC GCGGCCAGCG GCGGCTACTG GGTTTCGACG
CCCGCGCAGC GCATCTTTGC AGAGCCCAGC ACGATCACTG GTTCGATCGG CGTGTTCGCC
GTCCTGCCGA CGTTCGAGCA GACCCTGCCG CAGTATGGGG TGACGACCGA ACAGGTCCGC
ACCACCCCGC TTTCCGGCCA GCCCGATCTC CTCGGTGGTC TCAACCCTCA GGTCTCGGCG
CTCATGCAGG GGCAGGTCGA ACAGACCTAC ACCCGCTTCC TCGGCCTCGT CGCCAAGGCG
CGCGGCAAAT CCCCTGCCGA CATCGACAGG ATCGCGCAGG GACGCATCTG GGACGGCGGT
ACTGCACGCC AATTGGGCCT GGTCGACCAG TTCGGCGGGC TGGACGACGC GGTCGCATGG
GTCGCCAAGC AGGCCAAGGC CGACAAGTGG CACGCCGAAT ACGTCGAGGA CGAACCCAGC
CCTGTCGCCC AGTTCCTCCG CCAGATGGAA ACCGGCGAGG CACCCGAGGC AAGAGCGCAC
GATCTTGCAG GCGCGCTGGC AGCGCAGCAG CAGGGCCTTG TCGCGCGCAT GCAGGCGGAC
CTGCTGCGGC TGATCGAAGG CGGCGGGATC AAGGCTTATT GCCTGGAGTG TGCAAGCGAT
GATCGGGGCA CCGCGAATAT GCGGCAGCGG AAGGCCGATT TGGGGCTTCT GGCCTGGCTC
GGACGGCTGG TTGCCTGA
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| Protein sequence | MSFARSVWKI LVAIKDGLVL LFLLLFFAGL YAVLAMRPAP GMVREGALYL PLEGRVVEEA
TEISPADFLT GQTPAPEYVE RDLTRAIEAA ATDKRIKAVV LDLESFGGGS AVHLSSIGAA
MDRVRAARKP VFVRSLIYTD DAMQLAAHAS EAWVDPMGGV AITGPGGTML FYKGLIDKLK
ANVHIFKVGT YKSAVEPYMR AQSSPEAREA MQAVYGAIWQ NWQDEVRKAR PKADLALATT
DPAKWVADNG GDAAQAALKS GLIDRVGDRI AFGKRVAEVV GADDQGPLGS FKATELPVYL
ADKPAAKDGS AIAVVTVAGE IVDGDAGPGV AGGDRIADLI DGVTQADDYA GLVLRVDSPG
GSVMASERIR AAVERVRAKG LPVAVSMGSV AASGGYWVST PAQRIFAEPS TITGSIGVFA
VLPTFEQTLP QYGVTTEQVR TTPLSGQPDL LGGLNPQVSA LMQGQVEQTY TRFLGLVAKA
RGKSPADIDR IAQGRIWDGG TARQLGLVDQ FGGLDDAVAW VAKQAKADKW HAEYVEDEPS
PVAQFLRQME TGEAPEARAH DLAGALAAQQ QGLVARMQAD LLRLIEGGGI KAYCLECASD
DRGTANMRQR KADLGLLAWL GRLVA
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