Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3054 |
Symbol | clpX |
ID | 3916667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3269818 |
End bp | 3271074 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640445835 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_498323 |
Protein GI | 87201066 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0723606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGC TTTCCGGATC GGATACCAAG AGCACCCTCT ACTGCAGCTT CTGCGGGAAA TCGCAGCACG AGGTGCGCAA GCTGATCGCC GGGCCGACCG TGTTCATCTG CGATGAATGC GTCGAACTGT GCAACGACAT CATCCGTGAA GAGACCAAGG CCGGCATCGC CGGGAAGAAG GACGGTGGCG TACCCACGCC GCGCGACATC TTCGAGACTC TGAACGATTA TGTGATCGGC CAGGACCGCG CCAAGCGCGT GCTCTCGGTT GCAGTCCACA ACCACTACAA GCGCCTCAAG CACAGCGGCA AGGGCGGCGA CGTCGAACTG TCGAAGTCGA ACATCCTGCT CGTCGGTCCG ACCGGCTCGG GCAAGACCCT GCTTGCGCAG ACGCTGGCCA AGACCTTCGA CGTGCCGTTC ACGATGGCGG ATGCGACGAC GCTGACCGAA GCCGGCTACG TGGGCGAGGA CGTCGAGAAC ATCATTCTCA AGCTGCTCCA GGCCTCGGAC TACAACGTCG AGAAGGCCCA GCACGGCATC GTCTACATCG ACGAGATCGA CAAGATCAGC CGCAAGGCGG AAAATCCGTC GATCACGCGC GACGTGTCGG GCGAAGGCGT GCAGCAGGCC CTGCTCAAGC TGATGGAAGG GACGACCGCC TCGGTTCCGC CGCAGGGCGG GCGCAAGCAT CCGCAGCAGG AATTCCTCCA GGTCGACACC ACGAACATCC TGTTCATCTG TGGCGGCGCC TTCGCGGGCC TCGAAAAGAT CATCGCCGAC CGCCTGCAGA AGCGTTCGAT CGGTTTTGGC GCGCATGTTG CCGATCCCGA CAAGCGCAAG GTCGGCGAAC TGCTCCAGAA GGCAGAGCCC GAGGATCTCC TCAAGTTCGG CCTGATCCCG GAATTCGTCG GCCGTCTCCC GGTGATCGCG ACGCTCAACG ACCTCGACAT CGAGGCGCTG GTCAAGATCC TCAAGGAGCC CAAGAACGCA CTGGTAAAGC AGTACGCCAA GCTCTTCGAG CTTGAAGACG TCACCCTGAC CTTCACCGAC GACGCTCTCG AGGCGATCGC CAAGAAGGCC ATTGAACGCA AGACCGGCGC GCGCGGTCTG CGTTCGATCG TCGAAGGCCT TCTGCTCGAC ACCATGTTCG ACGTGCCGAC CGAAAGCGAC ATTGCCGAAA TCGTCGTCGA CAAGGATGTC GTCGAAGGTC GCAAGGAACC CGTCCGTGTC CTCAAGGGCA AGGAAGAAGC GGCCTGA
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Protein sequence | MTKLSGSDTK STLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCNDIIRE ETKAGIAGKK DGGVPTPRDI FETLNDYVIG QDRAKRVLSV AVHNHYKRLK HSGKGGDVEL SKSNILLVGP TGSGKTLLAQ TLAKTFDVPF TMADATTLTE AGYVGEDVEN IILKLLQASD YNVEKAQHGI VYIDEIDKIS RKAENPSITR DVSGEGVQQA LLKLMEGTTA SVPPQGGRKH PQQEFLQVDT TNILFICGGA FAGLEKIIAD RLQKRSIGFG AHVADPDKRK VGELLQKAEP EDLLKFGLIP EFVGRLPVIA TLNDLDIEAL VKILKEPKNA LVKQYAKLFE LEDVTLTFTD DALEAIAKKA IERKTGARGL RSIVEGLLLD TMFDVPTESD IAEIVVDKDV VEGRKEPVRV LKGKEEAA
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