Gene Saro_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3053 
Symbol 
ID3916666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3269011 
End bp3269586 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content65% 
IMG OID640445834 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_498322 
Protein GI87201065 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.937158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCA AGTTCCTGAT CGCCGCCCTG GCATCCACCG CAGCCACGGC CGCGCCCGTG 
TTCATCACCC CGGCCTATGC CAACCACCAT GAAGAGACCC AGACGGTCGG CGGCGCAGCG 
ATGTACCCGT CCAGAACGAT TGTCGAGAAC GCCGTGAATT CAGCCGACCA CACGACCCTG 
GTGGCAGCCG TCAAGGCTGC GGGGCTGGTC GACACGTTGA ACTCCGCCGG TCCGTTCACC 
GTGTTCGCGC CAACCAACGC GGCATTCGCC AAGCTTCCCG CAGGCACCGT GGACACGCTG 
CTGAAGCCCG AGAACAAGGC GACGCTTGCC AAGGTCCTGA CCTACCATGT CGTGGCGGGC 
AAGGTAACCG CAGCCGATCT GGTCGCCCGG ATCAAGGCCG ATGGCGGCAA GGCCGTACTG 
ACCACGGTAT CGGGCGGCAA GCTTGTCGCC TCGCTCATGG GGGACACGGT GATGCTGACC 
GACGAGAAGG GCGGAATGGC CCACGTGACG CAGGCTGACG TGATGCAGAA GAACGGCGTG 
ATCCACGTGA CCGACGCGGT TTCGCTGCCG AACTGA
 
Protein sequence
MSVKFLIAAL ASTAATAAPV FITPAYANHH EETQTVGGAA MYPSRTIVEN AVNSADHTTL 
VAAVKAAGLV DTLNSAGPFT VFAPTNAAFA KLPAGTVDTL LKPENKATLA KVLTYHVVAG 
KVTAADLVAR IKADGGKAVL TTVSGGKLVA SLMGDTVMLT DEKGGMAHVT QADVMQKNGV 
IHVTDAVSLP N