Gene Saro_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3027 
Symbol 
ID3916639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3237240 
End bp3238598 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content70% 
IMG OID640445807 
Producthypothetical protein 
Protein accessionYP_498296 
Protein GI87201039 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.678379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCG GAGCAAGGAC TTGCCCTGCG ACGCGCCATG TTCCACCTGT CCATCGGCGG 
CTACCATACG CAGTTCGCGC AGCGCCGCAG GGGAATGGCT TGGACGTTTT CGACCAGATG
GCAGGATTGC AGGCCTCGGC ACTGGCCGCC GCCGTGGCGG CGGGGCTGAT CCTCGGGATC
GAGCGGGGCT GGACCCAGCG CGAACGACCC GATGGCGCGC GCGTCGCCGG GATCCGCACG
TTCGGACTGT TCGGGCTTGT TGGCGGTCTT GCGGGGCTTC TTCCGGTGCC CGCGATGACG
GTGCTGCTCG CGACGGCGGG CCTTGTCGTG GCGGTGGGAT ACCGCGCCGC GCTGCGCGAG
GACCAGCTAT CGGCCACCAA TGCCGTGGCC GCCCTGCTGA CACTGGCAAT CGGATGCGCC
GCGACCCGCC TGTCGCCGGT GCTGGCGCTC GGGTCGGCGG CGGCGAGCTT TGCGTTGCTG
CGCTCTCGCC AGTCGCTGCA CGCGCTGCTG CGGGGGCTTG AAGAGCGCGA GATCGAGGCG
GTGGCGCGCT TCCTGCTGGT TTCGCTGGTG ATCCTGCCGA TCCTGCCGGA TGCGGATTTC
GGCCCATACG GCGCGTGGAA TCCCCGGCGC ATCTGGATGG TGGTCGTGAT GGTGACCGGC
CTTTCGTTTG CCGGATATGT CGCCGCGCGC CGGCTTGGGA GCGAGCGCGG AACGATGATC
GTGGCCGTGA CCGGGGCGCT GGTCTCCTCG ACGGCGGTGA CGGCAAGTTA TGCGCGCCGC
CTGGTTGCAG AGCCCGAGGC GCGGGGCGCA TTGGTTGCGG GTATCGCGAT GGCATCGGTG
GTGATGTTCG TGCGCGTACA GTTGGTGACG CTGGTTCTGG CACCGCGCGC GCTGCCGACG
TTGGCGTTGG TGCTTGCGCC GGCGGTGGTC GTGTCGGTCC TGCTCGCGCT CGTCGCCTGG
CGGCGCCAGG GTGAGGCGAC GGGCGGCGAG GTCGCCATCG GCAATCCTTT CGACTTCGGC
CCGGCGCTGC TGCTGGCGGC GATGGTCGCC GTCCTCTCGC TCATCGCGCG CTGGGCGCTC
GATGCGTTCG GCGGACACGG CATGGCGCTG TTGCTGGGGC TGACCGGCAT GATGGACGTC
GATGCGGCGG TGATGACGTT GTCGGGCCTT CCGCGAGAAG CGCTGGCCGA CGATCTGGCA
GGACTGGTGC TGGCCGGACC CGTGCTGGCC AATACGCTGG TGAAGGCGGG GATGGCGCTT
GCGCTGGGCG GCAGGCGCCA CGGCATGCAG GCAGCCGCCC CGCTCCTTGC TGCCTGCGCG
GCGTCGGCGC TGGGCCTCGC GTGGTGGTGG CTTGCGTGA
 
Protein sequence
MRIGARTCPA TRHVPPVHRR LPYAVRAAPQ GNGLDVFDQM AGLQASALAA AVAAGLILGI 
ERGWTQRERP DGARVAGIRT FGLFGLVGGL AGLLPVPAMT VLLATAGLVV AVGYRAALRE
DQLSATNAVA ALLTLAIGCA ATRLSPVLAL GSAAASFALL RSRQSLHALL RGLEEREIEA
VARFLLVSLV ILPILPDADF GPYGAWNPRR IWMVVVMVTG LSFAGYVAAR RLGSERGTMI
VAVTGALVSS TAVTASYARR LVAEPEARGA LVAGIAMASV VMFVRVQLVT LVLAPRALPT
LALVLAPAVV VSVLLALVAW RRQGEATGGE VAIGNPFDFG PALLLAAMVA VLSLIARWAL
DAFGGHGMAL LLGLTGMMDV DAAVMTLSGL PREALADDLA GLVLAGPVLA NTLVKAGMAL
ALGGRRHGMQ AAAPLLAACA ASALGLAWWW LA