Gene Saro_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3007 
Symbol 
ID3916618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3225058 
End bp3225801 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content56% 
IMG OID640445786 
Producthypothetical protein 
Protein accessionYP_498276 
Protein GI87201019 
COG category[R] General function prediction only 
COG ID[COG5529] Pyocin large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG AAGCGCTCGC ATGGGCTTTC AAGCAAACCT GCAAGAGCAG CAGCGTGAAG 
TTTACGCTGG TGGCCATGTG CGAATGCGCC AATTACCGGA CCGGCGTGAT CCATCCATCG
ATCGATCACC TCTCCGAAAT TACCGGACAG AACCGCAAGA CCATCATCGC CAACGTGGCA
GAGTTGGAAG CCAGTGGTGT CATCGTTGAT ACCGGCGAGC GCATCGGTCG GACCAAGCAG
ATCAAGGTCT ATCGCTTGGC CATGGAAACA GTTCCAAAAA CGGAACAGTC CCAAAAACGG
AACAGTACCG AAAATGCTCC GAAACAGTCC CAAAAACGGG ACACGGAACC TTCTAAGGAA
CCTTCATGTT CTACAGAACC TAAAGGTTCT TCCGAACATA AGGCGCGCGA GGCCAAACCT
TTCCGGATGA TGGCTGATTG GTCGCCATCG CCACTGCCGA GCAATGTTCA AGCTCTGGTG
GACCTTTGGC CACCCGGCAG GTTCGAGCGC GAGATCGACC AGTTCCGCGA TTACTGGCTC
GACCGCACAG ATAGGCGCCC CGGATGGGAT CGCACCTTCC ACAATCGCAT CCGCGACATT
CACGACCGAG TTATGAGGGA AACCCGCAAT GACCGCCCAG CTAGCAACGA CCAAGGCATC
ACAAACCCTT ACGCTCGCGC CGTCGTTGCC CGACAAGCTG AACGCGCTGG TCATGTCGTC
GGACAACCCG ATAGTTGGCC CTAA
 
Protein sequence
MSSEALAWAF KQTCKSSSVK FTLVAMCECA NYRTGVIHPS IDHLSEITGQ NRKTIIANVA 
ELEASGVIVD TGERIGRTKQ IKVYRLAMET VPKTEQSQKR NSTENAPKQS QKRDTEPSKE
PSCSTEPKGS SEHKAREAKP FRMMADWSPS PLPSNVQALV DLWPPGRFER EIDQFRDYWL
DRTDRRPGWD RTFHNRIRDI HDRVMRETRN DRPASNDQGI TNPYARAVVA RQAERAGHVV
GQPDSWP