Gene Saro_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2939 
Symbol 
ID3917374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3155971 
End bp3157107 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content67% 
IMG OID640445717 
ProductFAD dependent oxidoreductase 
Protein accessionYP_498208 
Protein GI87200951 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTC CCGAAATCAC TGCCGACGTC GCCATCATCG GCGGCGGGTT GATGGGCTGC 
TCGGCCGCTT TCTTCCTGCG CCAGCGGGGG CTGTCTGTCG TCCTGCTCGA AACCGACAAG
GTTGGCCGCC AGGCCAGCGG CACCAACTTC GGCAACGTCC GTCGCCAGGG CCGTCCCATC
TTCCAGCTCC CGCTCGCCAA CCGCGCAAGC CGCATATGGC GGCAGGCCAA CGAACTGCTG
GGAAGCGATG TCGAGTATCT GCAGAACGGC CACATCCGCG TCTGCTTCCG CGAGCGGCCG
GAAAACGTCG GCAAGATGGA GGAATACGCG GCCCAGGCGC GAGAGGAGGG GCTCGATCTC
GAACTCCTTT CGGGCAACGT GCTGCGCGAA CGCTTCCCCT TTCTAGGCCC TGACGTCATC
GCCGGCTCCC ACTCTGCGCT CGACGGGCAC GCCAACCCCC GACTTGCCGC TCCGGCCTTT
GCCCGCGCCG CGATGAAGCT GGGCGCGCAC GTGGTCGAGG ACACCCGTAT CGTCCACGCC
GCCAAGATCG GCGAGGACTT CGTGCTCGAG GCTGCCGACG GTCGCCGCTT CCGCGCGCCG
ACGCTGCTCG TCACCGCGGG GGCGTGGGCG GGCAAGATCG TCTGCCAGTT CGACGAGCCG
GTGAAGCTCA CGCCGCGCGC GCCCACGATG AGCGTGACCG AGCCGGTGCC CTACTCGATC
CTCCCCGCGG TGGGCGTGAT GACGCCTGAT GAGGTGGAGA CGGTCTATTT CCGCCAGGTC
GCGCGCGGCA ACGTGATCCT CGGCGGATCG ACCCGTGCGC CATCCTACCC GGATGAGTAC
CGCTCCTACG TCATGCCGCA GAATACGATG ACCCAGTTCC AGCACTTGCG CCGCCTCGCG
CCGGCGCTGG CGAACCTTCA GGTCATCCGG GTCTGGAGCG GCATCGAGGG CTATACCGAC
GATGGCCAGC CGGTGATGGG CCCCAGCGCC ACGGTGCCGG GCCTGTTCTA CGCGTTCGGC
TTCTCGGGTT CGGGCTTCCA GATCGGTCCG GGCGTGGGCG AGACGATGGC TGAAGTCATT
GCCACCGGCC ACACCGACAT TCCGCTCGAT CCCTACTCGA TCAAGCGCTT CGCCTGA
 
Protein sequence
MTAPEITADV AIIGGGLMGC SAAFFLRQRG LSVVLLETDK VGRQASGTNF GNVRRQGRPI 
FQLPLANRAS RIWRQANELL GSDVEYLQNG HIRVCFRERP ENVGKMEEYA AQAREEGLDL
ELLSGNVLRE RFPFLGPDVI AGSHSALDGH ANPRLAAPAF ARAAMKLGAH VVEDTRIVHA
AKIGEDFVLE AADGRRFRAP TLLVTAGAWA GKIVCQFDEP VKLTPRAPTM SVTEPVPYSI
LPAVGVMTPD EVETVYFRQV ARGNVILGGS TRAPSYPDEY RSYVMPQNTM TQFQHLRRLA
PALANLQVIR VWSGIEGYTD DGQPVMGPSA TVPGLFYAFG FSGSGFQIGP GVGETMAEVI
ATGHTDIPLD PYSIKRFA