| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2870 |
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| Symbol | |
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| ID | 3915509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3092342 |
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| End bp | 3094459 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640445649 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_498140 |
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| Protein GI | 87200883 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.489222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGA AGGTCCTGGG ACTTATGGCC GCACTGCTGC CGCTGGCGGC GTGCAACATC
AAGAGCGAGG GCGGCGGGGA TGCCGTCGCC AACGCCGGCG TCACCGACGC CCTCATCGCC
CAGGCGCCCG AAGGCGAATG GCTGAGCTAT GGCCGCGATT ATGGCGAGCA GCGCTTCTCC
CCGCTCACCC AGATCAATGA CGGCAACGTC GGCCAGCTCG GTCTTGCCTG GTTCCATGAC
CTCGAGACCG CGCGCGGGCA GGAAGCCACG CCGCTGATGC ATGACGGCAC GCTCTACATC
TCGACCGCGT GGTCGATGGT GAAGGCGTTC GATGCCAAGA CCGGCGCGCT CAAGTGGTCC
TACGATCCCG AAGTCCCGCG CGAGACGCTG GTCCGCGCCT GCTGCGACGC GGTCAATCGC
GGCGTCGCGC TCTATGGCGA CAAGGTCTTC GTCGGCACGC TCGACGGTCG CCTCGTCGCG
CTCGACCAGA AGACCGGAAA GGTCGTCTGG TCCAAGGTCG TCGTGCCCAA CCAGGAGGAC
TACACCATCA CCGGCGCCCC GCGCGTGGTG AAGGGCAAGG TTCTGATCGG TAGCGGCGGC
TCGGAGTACA AGGCGCGCGG CTATATCGCC GCCTACGACG TCAACACCGG CAACGAAGTG
TGGAAGTTCC ACACCGTCCC CGGCAATCCA GCGGACGGGT TCGAGAACAA GGCGATGGAA
AACGCCGCCC GCACGTGGGC TGGCGAATGG TGGAAGCTCG GCGGGGGCGG CACGGTGTGG
GATTCCATCA CCTATGATCC CGCCACCAAC CTCGTCCTGT TCGGCACCGG CAATGCCGAG
CCATGGAACC CGGCCGCAGC CGGGCGCGAG GGCGACAGCC TCTACACGTC CTCGATCGTC
GCGGTGAATG CCGATACCGG CGACTATGTC TGGCATTTCC AGGAAACCCC GGAAGACCGC
TGGGACTTCG ACTCCGCGCA GCAGATCACG CTGGCCGACC TGACCATCGA TGGGCAGCGG
CGCCACGTGA TCCTTCATGC GCCCAAGAAC GGTCACGTCT ATGTGCTCGA CGCCAGGACC
GGGCAGTTCC TGTCGGCAAC GCCCTTCGTG ATGGTCAACT GGGCGACCGG TATCGATCCC
AAGACCGGCA AGGCCACCGT CAATCCCGAA GCCCGCTATG AAAAGACCGG CAAGCCCTTC
GTCAGCCTGC CCGGTGCGGT CGGCGCACAC TCCTGGCAGC CGCAGAGCTT CAGCCCGAAG
ACCGGCCTGC TCTACCTTCC GGTGAACAAC GCGGCATTCC CCTATGCCGC CGCCAAGGAC
TGGAAGGCCA CCGACATCGG CTTCCAGACC GGCCTCGACG GCTATGTCAC CTCGATGCCC
GCCGACGCCA AGGTCCAGGG CGCCGCGATG AAGGCGACCA CCGGTACGCT CGTGGCGTGG
GACCCGGTTG CGAAGAAGGC CGCGTGGAAG GTCGAACTGC CGAGCCCGTC GAACGGCGGC
ATTCTCTCGA CCGCTGGCAA TCTCGTGTTC CAGGGCACCG CGGGCGGCGA TTTCGTTGCC
TACAACGCCG ACAAGGGCAA GCAGCTCTGG TCGTTCCCGG CGCAGAGCGG CATCCTTGCC
GCGCCGATGA CCTATGCGAT CGACGGCGAA CAGTACGTCG CGGTCATGGT CGGCTGGGGC
GGCGTGTGGG ACGTCGCCAC CGGCGTCCTC GCGCACAAGG CCAAGAAGCA GCGCAACATC
AGCCGCCTGG TCGTGTTCAA GCTCGGCGGC AAGGCCACGC TGCCCGCTGC TCCCCCGATG
GCCAAGATGG TCCTCGATCC GCCGCCGTTC ACCGGCACGC CCGAACAGGC CAAGGCCGGC
GGCGAACTCT ACGGACGCTA CTGCAACGTC TGCCACGGCG ATGCGGCGGT TGCGGGCGGC
GTGAACCCCG ATCTGCGTCA CTCCGCGGCG CTCAATGCCC CCGAGGCGAT CCGCTCGGTG
GTGATCGAGG GCGCGCTGCA GCACAACGGC ATGGTCTCGT TCAAGTCGGC GCTGAAGCCC
GAGGATGCGG ACAACATCCG CCACTACCTC ATCAAGCGCG CCAACGAGGA CAAGGCTCTC
GAAGCCAAGG GCGGCTGA
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| Protein sequence | MRLKVLGLMA ALLPLAACNI KSEGGGDAVA NAGVTDALIA QAPEGEWLSY GRDYGEQRFS
PLTQINDGNV GQLGLAWFHD LETARGQEAT PLMHDGTLYI STAWSMVKAF DAKTGALKWS
YDPEVPRETL VRACCDAVNR GVALYGDKVF VGTLDGRLVA LDQKTGKVVW SKVVVPNQED
YTITGAPRVV KGKVLIGSGG SEYKARGYIA AYDVNTGNEV WKFHTVPGNP ADGFENKAME
NAARTWAGEW WKLGGGGTVW DSITYDPATN LVLFGTGNAE PWNPAAAGRE GDSLYTSSIV
AVNADTGDYV WHFQETPEDR WDFDSAQQIT LADLTIDGQR RHVILHAPKN GHVYVLDART
GQFLSATPFV MVNWATGIDP KTGKATVNPE ARYEKTGKPF VSLPGAVGAH SWQPQSFSPK
TGLLYLPVNN AAFPYAAAKD WKATDIGFQT GLDGYVTSMP ADAKVQGAAM KATTGTLVAW
DPVAKKAAWK VELPSPSNGG ILSTAGNLVF QGTAGGDFVA YNADKGKQLW SFPAQSGILA
APMTYAIDGE QYVAVMVGWG GVWDVATGVL AHKAKKQRNI SRLVVFKLGG KATLPAAPPM
AKMVLDPPPF TGTPEQAKAG GELYGRYCNV CHGDAAVAGG VNPDLRHSAA LNAPEAIRSV
VIEGALQHNG MVSFKSALKP EDADNIRHYL IKRANEDKAL EAKGG
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