Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2837 |
Symbol | |
ID | 3915476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3063296 |
End bp | 3064606 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640445616 |
Product | ribosomal large subunit pseudouridine synthase C |
Protein accession | YP_498107 |
Protein GI | 87200850 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0449259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGGG CCAAGATGCC GGACGATCAG GTCCGCCAGT TCACCATCGG CAAGGACGAT GCGGGGGCCC GCCTCGACCG CTGGTTCAAG CGCCACCTGC CGCAGGTCGG CTTTGCCACG GTATCGCGCT GGGCGCGGAC CGGGCAGATC CGGATCGACG GCAAGCGGGC CGATGTCGAC ACCCGGCTCG AGGCCGGCCA GATCCTGCGC GTACCGCCAG GCAACGCGAC CCCCGTCGGC ACCCCCGGCA AGGGCGAGCG CGCGCGCAAG CCGCTGACCG AGGAACAGAT CCAGCTCGCC GAATCGATGG TGCTGGAAAA GGACCGCGCC GCCATCGTGC TCAACAAGCC GCCGGGCCTT GCGACGCAAG GCGGCAGTGG CACGCACGAG CACGTCGACG GCCTGCTCGA CGCCTATGTC AACGAGGGCG AAGCGCGCCC ACGGCTGGTG CACCGGCTCG ACAAGGACAC CTCTGGCGTC CTGCTCATCG CGCGCACGCC GGGCAGCGCG GCATTCTTTT CCAAGCGCTT CTCCTGCCGG TCGGCGCGCA AGATCTACTG GGCGCTGGTC GTCGGCGTGC CCGACGTCAA GGACGGCCTG ATCGAACTGC CGCTGGCCAA GCAGCCGGGC ACCGGCGGCG AGAAGATGAT GGTCGACGAA AGCGGCCAGG GCCAGTCTGC CCGCAGCCGC TACCGGGTAA TCAGCCGCGC GGGCAATGCC GCCGCGTGGG TCGAGCTACA GCCGCTGACC GGGCGCACCC ACCAGCTTCG CGTGCACATG GCTGCCATCG GGCACCCGAT CGTGGGCGAC GGCAAGTATG GCGGGCAGGC GGCGTTCCTG ACCGGATCGA TCAGCCGCAA GATGCACCTC CACGCCCGGC GCCTCAGGAT CGAGCATCCC GAAGGCGACA TGATCGACGT GACCGCGCCG CTGCCCGCGC ACTTCGCGGC GAGCATGGCG AGCCTCGGCT TCCACGAGGA AGAAGGCGAC CTGCCGCTCG AGCCGGTCAA GCTGGTCGAC GAGAAGACCG AGCAGAAGCG CGCGGCCAAG GCGCATGCCA AGGAGTACCG CAAGGAACGC CGGGGCGAGC GTCGCAAGCG CGTCGACGGC GGCACCTCGC GCAAGCCGAC GGGCAAGCGG GCCTCTCCCA AGGCCGGGGC CAAGCCTGCT GCCGGAAAGC CTGCTGCTGC GAAGTCCGGC GCGAAGCCGG GGGCGAAGAA GCCGGCAGCC AGGACGACGG CCGGGGGCAA GCCCGCGCGC GCCGCCGCGC CGCGCAAGCC CGCTGGTCCG CCCAAGGCCA AGGGGGGCTG A
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Protein sequence | MSRAKMPDDQ VRQFTIGKDD AGARLDRWFK RHLPQVGFAT VSRWARTGQI RIDGKRADVD TRLEAGQILR VPPGNATPVG TPGKGERARK PLTEEQIQLA ESMVLEKDRA AIVLNKPPGL ATQGGSGTHE HVDGLLDAYV NEGEARPRLV HRLDKDTSGV LLIARTPGSA AFFSKRFSCR SARKIYWALV VGVPDVKDGL IELPLAKQPG TGGEKMMVDE SGQGQSARSR YRVISRAGNA AAWVELQPLT GRTHQLRVHM AAIGHPIVGD GKYGGQAAFL TGSISRKMHL HARRLRIEHP EGDMIDVTAP LPAHFAASMA SLGFHEEEGD LPLEPVKLVD EKTEQKRAAK AHAKEYRKER RGERRKRVDG GTSRKPTGKR ASPKAGAKPA AGKPAAAKSG AKPGAKKPAA RTTAGGKPAR AAAPRKPAGP PKAKGG
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