| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2652 |
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| Symbol | |
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| ID | 3918426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2887977 |
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| End bp | 2889494 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640445429 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_497922 |
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| Protein GI | 87200665 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGGCGG GCGAAGACAT CGAGGGCATG ACCGTTGCGG TCGCGCAGGC CGGGCCTGCG
ATGCCCTATG CCTTCGCGCG CGACCGCGGC GTCCTCGTGG AAAGCCTGAA CGACACCGAG
GTTACGGTGG CCCTGCGCGA GGGCGGCGAT CCGCTCGCGT TGCTCGAAAT CAGGCGCGTA
CACAAACGAC ACCTAAACGT ACACGAAGTG ACCACAACCG AGTTCGAGAA GCTCCTCGCC
ACGGCCTATG CGGTCGACGG GGCGGCGGCT GCGGTGGCCG GCGACATGGG CATCGCGGGC
GACGCGCTCG ACCCTCTCGC GCTCGGCCTG CCGACCGCAG AGGACCTCCT CGACAGCGCC
GATGACGCGC CCGCGATCCG CCTGATCAAT GGCCTGATCG CCGAGAGCTT GCGCCAGGGC
GTGTCGGACA TCCACATCGA ACCTTACGAA ACCGCGCTTG TCGTGAGGAT GCGGGTCGAT
GGCGTGCTGA CCGAGAAGCT GCGCATGCCG CCGCATGTCG CGCCGGTGCT GGTGAGCCGC
ATCAAGGTCA TGGCGCGGCT CGACATTGCC GAACGGCGCG TGCCGCAGGA CGGCCGTATC
TCGTTGAGCC TGGGCGGAAA ACTGGTCGAC GTGCGCGTCT CGACCCTGCC CAACCGCGCC
GGCGAGCGAG TGGTCATGCG CCTGCTCGAC AAGGAAAATG CCGGACTGGA CCTCGTCCAT
CTCGGCCTCG ACCCCAAGTC GGAAGACGTC CTGAGCCGGG CCCTGGCGGA GCCAAACGGC
ATCGTGCTGG TGACCGGCCC GACGGGTTCG GGCAAGACGA CGACGCTCTA TGCGGCGTTG
CGCGGCCTCA ACGATGGCGC GCGGAATATC CTTACTGTTG AAGACCCTGT GGAATACGCT
GTGGATGGCG TCGGCCAGAC GCAGGTCAAC GCCAAAGTCG GGCTGACCTT CGCGGCGGGA
TTGCGCGCGA TCCTCCGCCA GGACCCGGAC GTGGTCATGG TCGGCGAAAT CCGCGACCGG
GAAACCGCTG AAATCGCGGT GCAGGCGTCG CTGACCGGCC ACCTCGTGCT GTCGACCGTG
CATACCAACG ACGCGGCCGG CGCGGTCACG CGCATGCGCG ACATGGGGGT GGAGCCGTTC
CTGCTGGCAT CGACCCTGCG CGCGGTGATC GCACAGCGGC TGGTGCGCCG GCTCTGCCCG
CATTGCCGCG AGGAGCGTGT CCTCGACGCG GGAATGGCCG AAGTCCTCGG TCTTGAGGCG
GGCAGCAAGG TCCGTGCCGC ACGCGGCTGC GCAGAGTGCG GCCAGACCGG ATACCAGGGC
CGTATCGGCG TGTTCGAGGC GCTGCGGGTG GACGATGCGA TCCGCCAGAT GATCCACGAC
AATGCCGACG AGGCGGCCAT CGCGCGCCAT GCCTTCGCCG ATGCGCCGAC CCTTGCGGGA
TCCGTGCGCC GCCTTGTCGC CGAAGGAGCG ACGAGCCCCG AGGAAGCGGC ACGCATCATG
CGGCGGGACG GGGCCTGA
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| Protein sequence | MEAGEDIEGM TVAVAQAGPA MPYAFARDRG VLVESLNDTE VTVALREGGD PLALLEIRRV
HKRHLNVHEV TTTEFEKLLA TAYAVDGAAA AVAGDMGIAG DALDPLALGL PTAEDLLDSA
DDAPAIRLIN GLIAESLRQG VSDIHIEPYE TALVVRMRVD GVLTEKLRMP PHVAPVLVSR
IKVMARLDIA ERRVPQDGRI SLSLGGKLVD VRVSTLPNRA GERVVMRLLD KENAGLDLVH
LGLDPKSEDV LSRALAEPNG IVLVTGPTGS GKTTTLYAAL RGLNDGARNI LTVEDPVEYA
VDGVGQTQVN AKVGLTFAAG LRAILRQDPD VVMVGEIRDR ETAEIAVQAS LTGHLVLSTV
HTNDAAGAVT RMRDMGVEPF LLASTLRAVI AQRLVRRLCP HCREERVLDA GMAEVLGLEA
GSKVRAARGC AECGQTGYQG RIGVFEALRV DDAIRQMIHD NADEAAIARH AFADAPTLAG
SVRRLVAEGA TSPEEAARIM RRDGA
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