| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2602 |
|---|
| Symbol | |
|---|
| ID | 3917017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2812382 |
|---|
| End bp | 2813683 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640445361 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_497872 |
|---|
| Protein GI | 87200615 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.317433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGA ACGCCGAACT CTGGACCCGT CGCGAAGCCG CCGTGCCGCG CGGTGTCTCC
TCGATGCACC AGCGCTTCTT CGCGCGGGGT GAAAATGCCG AGGCCTTCGA TGCTGAAGGC
AACCGCTACA TCGATTTCGC CACCGGCATC GCGGTGTGCA ACACCGGCCA CGGGCATCCG
CGCGTGCTTG CGGCGGTGCA GCGCCAGCTT GACGCGTTTT CGCACTGCTC GTTCCAGGTG
ACGCCTTACG AAAACTACAT CGAGCTGGCC GAACGGCTGA ATGCGATTGC TCCCATCGAC
GGACCGGTGA AGTCGATCTT CTTCACCACC GGTGCCGAGG CGCTGGAGAA CGCTGTGAAG
ATCGCGCGTG CGCATACCGG GCGCCGCGGC ATCATCACTT TCCAGGGCGG CTATCACGGT
CGCACGCTGC TGACGCTGGC GATGACCGGC AAGGTCCTGC CCTACAAGGC GCGGTTCGGG
CCGATGCCGG GCGATGTGTT CCATGCGCGC TTTCCCATCC CCTACCACGG CTTTTCCGAG
GAAGAGGCGA TTGCCGGGAT CGAGGCGCTG TTTGCCTCGG CCATCGAACC TTCGGCGGTT
GCGGCGATCG TGCTGGAACC GGTCCTGGGC GAGGGCGGGT TCTACACCGC GTCCTATGCC
TTCTTCCGTG CCTTGCGGGA GATCTGCGAC CGTCACGGCA TTCTGCTGAT CGCGGACGAG
GTCCAGGCCG GTTTTGCCCG CACTGGCCGC ATGTTCGCGA TGGACTGGGT GCGCGAGGCC
ACCGGCGTGA CGCCGGACCT GATGACCGTT GCCAAGGCGA TGGCGGGGGG TTTCCCCATT
TCGGGGGTGA TGGGCCGGGC CGAGATCATG GACGCGCCCG ATCCGGGCGG GCTTGGCGGC
ACCTATGGCG GATCGCCACT GGGCTGCGCG GCGGGGCTGG CGGTGCTCGA CGTGATTGCC
GACGAGGACT TGTGCGCACG TGCCGTCGCC ATCGGGAACC GGATCAAGGC CCGCCTGCGC
CGGATGCGCG ACAATGGCAT GACCGCCATC GGCGACGTGC GCGGGCCGGG CGCGATGATT
GCGATGGAAC TGGTCCACGA TGGCGATCCG TCGCGGCCGA ACCCGGATGC GACCCGTGCG
CTGGTGCAGG AAGGCGCGCG CGAGGGCCTG TTGCTGCTGT CGTGCGGGCT GCGCGGGAAC
GTCGTGCGCT TCCTGCCGGC GCTGACCATG CCGGACGCCC TGCTCGACGA AGCGCTCGAC
AGGCTGGAGA TTGCGCTGAA CCGGGTGCTG GGCGGGCAGT GA
|
|---|
| Protein sequence | MTTNAELWTR REAAVPRGVS SMHQRFFARG ENAEAFDAEG NRYIDFATGI AVCNTGHGHP
RVLAAVQRQL DAFSHCSFQV TPYENYIELA ERLNAIAPID GPVKSIFFTT GAEALENAVK
IARAHTGRRG IITFQGGYHG RTLLTLAMTG KVLPYKARFG PMPGDVFHAR FPIPYHGFSE
EEAIAGIEAL FASAIEPSAV AAIVLEPVLG EGGFYTASYA FFRALREICD RHGILLIADE
VQAGFARTGR MFAMDWVREA TGVTPDLMTV AKAMAGGFPI SGVMGRAEIM DAPDPGGLGG
TYGGSPLGCA AGLAVLDVIA DEDLCARAVA IGNRIKARLR RMRDNGMTAI GDVRGPGAMI
AMELVHDGDP SRPNPDATRA LVQEGAREGL LLLSCGLRGN VVRFLPALTM PDALLDEALD
RLEIALNRVL GGQ
|
|---|
| |