| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2601 |
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| Symbol | |
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| ID | 3917016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2809891 |
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| End bp | 2812260 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640445360 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_497871 |
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| Protein GI | 87200614 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.889408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATT GCGTGAAGTT CGCGTGCTCC GCTTCGTTGC TGGTCCTGGC GATGCAGTCT
TCCGCCGTCG CGGCGCAGGA CGTGCAAGGC AATGCCGGCG TTGCTGAAGA GACGACCCCG
GTCTTCGGCG ACATCGTGGT GACGGCCAAC AAGCGCCAGG AAAACGCCCA GAAGGTTCCG
ATCGCGATCA CCGCCTATTC GGGCGATCAG CTCAAGGCGC TGGGCGTTAC CGATGCGACG
CAGATCACCC AGCAGGTGCC AGGGCTCCAG CTCAACGCCT GGTCGCCGAA CGTCACGATC
TTCAACTTGC GCGGCATTTC GCAGAACAAC TTCACCGACT ACCTCGAGGC GCCGATCGCG
GTCTATGTCG ACGATGCCTA TATGGGGTCG ATCAACGGGC TTTCGGGGCA ATTGTTCGAC
GTGCAGCGCG TCGAGGTGCT GCGCGGGCCG CAGGGGACGC TTTTCGGTCG CAATGCAACC
GGCGGCCTGA TCCATTACCT GTCGACCGAC GCCAGCAAGG CGGAGTTCAA CGGCTACCTC
ACGGCGAGCT ACGAGCGCTT CGACCGGCGC GCGCTCGAAG GCGCGGTCGG TGGGGCGCTG
GCGGACGGCA TTCGCGCGCG CGTTGCCGGG CGCGTGGTCA AGGCCGACGG CTACATCAAG
TCGGCCGCGG CATTGCCGGG CGTGTTCGAG GCCAACGGGC AGGATCTGGG CAGCGAGAAC
GGCTGGGCCC TGCGCGGCAC GATCCAGGCC GATCTCGGCC CCGACGGCAA GCTTGACCTG
TGGGTCAAGC ACAGCGAGGA CAACGACGTC GCGACCGGCG GTTATGTCTT CGACAACTGC
AACCTGCAGG ACAACGGTTA CTGCGGCACC GACGCGGCGG GGCTGGGCAA TGGCAGCGGC
GGGGTCATCA ACGGCATCAC CGGCGAACCC GCCAGCCCCT TCCAGAACTT CAGCGACACG
CCCGGTGTGT TCAACCGCAA CACCAACATC TACCAGGGCA AGCTGACCTA CGACCTGGGC
GGGGTGAACC TGACCGCGAT CACCAACTAC ACCGACCTCA GGAAGGATTA CCAGGAAGAC
GGTGACGCCC TGCCGGTGGA AGTCATCGTG TTCCGCACGA ATGCCCGCTA CCGGCAGTTC
AGCCAGGAAC TGCGCCTGGC GGGCGAAAGC GAGCGCTTCC GTTGGCAGGC GGGCGCCTAC
TACCTCGACA TGAAGATCAA GGGCGGCATG GACACGGTGG GCGCGCCGGC CATCGGCGCC
GCGCTTGCGG CGGGCCTGCC CGGCGTCGCG CCGACGATTG CCGAGACCTA CAATCTGCAT
TCGAAGAACT GGTCGGTGTT CGGCCAGGCG GAATACGACC TGTCCGACAA GCTCACCGTG
ATCGGCGGCT TGCGCTATTC CAAGGATACC AAGACGGTCG ACTACCGGTC GGCAGTGGTG
GAGGGCGCCG CCTCGTCGCT GATCGCCACG GACGAGACGT TTTCGGCCAC GCTGCCCGGC
GCGGACCGCA TTTCGGACGG CGACATCGCC GCGCGCGTCA CGCTGAACTA CAAGCCCGCG
GACGATACGC TGGTGTTTGC TTCGTGGAAC CGCGGCATCA AGGGCGGCAA CTTCACGCTG
AACGGTTATG TCACCGCGCA AACCTTCCAG CATCGTCCGG AAACGCTCAA TTCGTTCGAG
GCGGGCGTGA AGTGGTCGAA CCCCTCGCGT ACGCTGCGCG TCAATGCCAC GGCCTATCAC
TACATCTACA ACGACTATCA GGCTTTTGCG CTGATCGGCG GCGTGCCGCA GGTCGGCAAT
AGCGACGCCA ACGCGACGGG CTTCGAGCTG GAAACCTTCT TCCAGCCGAC CGACCACCTG
AATATCAACC TGGGCGCGAC GTGGGAGCGT ACCCATGTCG ATACCGTCCA GACCGCCGGA
TCGCAGTTCC TGTCGGTTCT GGTGCCGGGA GCGTCGGTGC CCCAGTATTG CACCGACCAG
AACGACGGCA CCTATTTCTG CGACTACCCG ACCAAGTCGG TCAGCGGCGC GCAGTTCCCC
AACGCGCCGA AGTTGAGCCT GAACTATGTC CTGCGCTACA ACGTCGATGC CTTTGGCGGC
AATGTCGTCG CGCAGGTCGA CGGCGTCTGG TACGACAAGC AGTTCCTCGA AGTCACCAAT
GGCCGGTCCT CGATCCAGCC GGCCTACAAC GTGACCAACG CCTCGCTGAG CTGGACGTCC
GACGACGATC GCCTTTCGGT GCAGGTGTTC GGCCGGAACG TCTTCGACAA GGCCTATCGC
GCCTATGCGC TCAACCTCGG ACCGCTCGGC ACGACCTCGG TCTACGCCAA GCCCGCCACC
TATGGCGTCA GCGCCACGGT CAAGTGGTAG
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| Protein sequence | MKNCVKFACS ASLLVLAMQS SAVAAQDVQG NAGVAEETTP VFGDIVVTAN KRQENAQKVP
IAITAYSGDQ LKALGVTDAT QITQQVPGLQ LNAWSPNVTI FNLRGISQNN FTDYLEAPIA
VYVDDAYMGS INGLSGQLFD VQRVEVLRGP QGTLFGRNAT GGLIHYLSTD ASKAEFNGYL
TASYERFDRR ALEGAVGGAL ADGIRARVAG RVVKADGYIK SAAALPGVFE ANGQDLGSEN
GWALRGTIQA DLGPDGKLDL WVKHSEDNDV ATGGYVFDNC NLQDNGYCGT DAAGLGNGSG
GVINGITGEP ASPFQNFSDT PGVFNRNTNI YQGKLTYDLG GVNLTAITNY TDLRKDYQED
GDALPVEVIV FRTNARYRQF SQELRLAGES ERFRWQAGAY YLDMKIKGGM DTVGAPAIGA
ALAAGLPGVA PTIAETYNLH SKNWSVFGQA EYDLSDKLTV IGGLRYSKDT KTVDYRSAVV
EGAASSLIAT DETFSATLPG ADRISDGDIA ARVTLNYKPA DDTLVFASWN RGIKGGNFTL
NGYVTAQTFQ HRPETLNSFE AGVKWSNPSR TLRVNATAYH YIYNDYQAFA LIGGVPQVGN
SDANATGFEL ETFFQPTDHL NINLGATWER THVDTVQTAG SQFLSVLVPG ASVPQYCTDQ
NDGTYFCDYP TKSVSGAQFP NAPKLSLNYV LRYNVDAFGG NVVAQVDGVW YDKQFLEVTN
GRSSIQPAYN VTNASLSWTS DDDRLSVQVF GRNVFDKAYR AYALNLGPLG TTSVYAKPAT
YGVSATVKW
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