| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2581 |
|---|
| Symbol | |
|---|
| ID | 3916995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2786581 |
|---|
| End bp | 2787276 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640445339 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_497851 |
|---|
| Protein GI | 87200594 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.658135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCT GCGATACATG CGTTGTGCGC AACCGGGCAA TTTGCGCCGG TCTGGATAAC
CGCGAGATCG CGGCACTCAA TACGTTGGGC CGCCGCCGGG CGGTTTCTGC GGGTGAACCG
CTGATGTGGG AGGACGACGA CTCGCTCCTC GTCGCCAACG TGATCGAGGG CGTTCTCAAG
CTGACGACCA GCACCGAGGA CGGGCGAGAG CAGATCGTCG GCGTGGCCTA TCCATCGGAT
TTCATCGGCC GGCCATTCGG CCAGACGAGC AGCGCGAGCG TTGTGGCGCT GACCGACGCG
CGGGTCTGCG TGTTCTCGCG CAACGACTTC GACCGTTTCG CGCGCGAGCA TCCGGAGCTT
GAACACAAGC TGCTGGAACG CACGCTCGCC GAACTCGACC GTACCCGGTC GTGGATGATG
CTGCTGGGCC GCAAGAACGC CTCGGAGAAG ATCGCGACGT TCCTGCTGGA GATGTCGGAC
CGGCTGGCCG AGACGGGCTG CACCCCGGCG TTCGGCCCGG CCAAGCGCTT TTCGCTGCCG
TTTTCGCGCC AGCAAGTGGC CGACGTTCTG GGCCTGACGA TCGAGACGGT GAGCCGGCAG
TTCACCAAGC TCAAGAACGA TGGCGTGATC GAACTGCCTT CGCGGCGCGA GGTCGAGATC
GTCAATCGCG GGGCTCTGGT CGCGCTGGCG GGTTGA
|
|---|
| Protein sequence | MTACDTCVVR NRAICAGLDN REIAALNTLG RRRAVSAGEP LMWEDDDSLL VANVIEGVLK
LTTSTEDGRE QIVGVAYPSD FIGRPFGQTS SASVVALTDA RVCVFSRNDF DRFAREHPEL
EHKLLERTLA ELDRTRSWMM LLGRKNASEK IATFLLEMSD RLAETGCTPA FGPAKRFSLP
FSRQQVADVL GLTIETVSRQ FTKLKNDGVI ELPSRREVEI VNRGALVALA G
|
|---|
| |