| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2484 |
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| Symbol | |
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| ID | 3916804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2686189 |
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| End bp | 2687103 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640445240 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_497754 |
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| Protein GI | 87200497 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.468436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCGACG GCTGGATCAT CCTCGACAAG CCTCTGGAAC TCGGGTCGAC TCAAGGGGTT
GCGGCGGTAA AGCGCAATCT GCGGCAGGCC GGCTACGGCA AGTGCAAGGT CGGACACGGC
GGGACGCTCG ACCCCCTGGC TACCGGGGTG CTTCCGATCG CGGTGGGCGA GGCGACGAAA
CTGTGCGGAC GGATGCTCGA TGCGAGCAAG GTCTATGCTT TCACGGTGGC CTTCGGAACG
GAGACCGACA GCCTCGATCT GGAGGGCGGA ATCGTCGCCA CCAGCGACGT CCGGCCGCCT
CTTGCGGACG TTCATGTCAC TTTAGGTGCG TTTCGGGATT CCATCGATCA GGTTCCCCCG
GCGTACTCGG CCCTGATGGT CGAGGGCAGG CGCGCCTATG ATCTCGCAAG GGCGGGCGAA
ACAGTCGAAC TGCCCTCGCG CCGGGTCACG ATCCATGCAC TCACGCTCGA TTCGTGGACA
GGAAGCGAGG GCGCGGTGGA AACGGCGACG CTGACCGCGC ACGTTTCGAA AGGCACATAC
ATCCGCAGCC TGGCCCGCGA TATCGCGCGC GCGCTGGGCA CGGTGGGCCA TGTGACGATG
CTGCGACGGC TCAAGGCGGG GCCGTTCGCC ATCGAGCAGG CGATTTCGCT GGACAAATTG
AACGCATTGG GTCAAGGCGC GCCCCTTGAA CACGTACTCT TGCCGCTGGA GGCAGGGCTG
GTCGACATCC CGGCTCTTGA CCTTGATCCC GAGCAGGCGA GGGCGGTCCG TCAGGGCCGC
GTTCTGACGG GATTGCCCTT CGAGGACGGG CTCTACTGGG CGAGGCTTGG CACTGTGCCG
GTCGCGCTGG TCGAGCTTTC CGACGGAAAC CTGAAGGTTT CGCGGGGCTT CAACTTACAG
GATGTCGCGG AGTAG
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| Protein sequence | MVDGWIILDK PLELGSTQGV AAVKRNLRQA GYGKCKVGHG GTLDPLATGV LPIAVGEATK
LCGRMLDASK VYAFTVAFGT ETDSLDLEGG IVATSDVRPP LADVHVTLGA FRDSIDQVPP
AYSALMVEGR RAYDLARAGE TVELPSRRVT IHALTLDSWT GSEGAVETAT LTAHVSKGTY
IRSLARDIAR ALGTVGHVTM LRRLKAGPFA IEQAISLDKL NALGQGAPLE HVLLPLEAGL
VDIPALDLDP EQARAVRQGR VLTGLPFEDG LYWARLGTVP VALVELSDGN LKVSRGFNLQ
DVAE
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