Gene Saro_2423 details

Gene Information

• Locus tag: Saro_2423
• ID: 3916742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2604974
• End bp: 2606890
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640445178
• Product: twin-arginine translocation pathway signal
• Protein accession: YP_497693
• Protein GI: 87200436
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3669] Alpha-L-fucosidase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.204978
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTGC CTGCCCTTTC CCGTCGCACC GTGCTGTCGG GCTCGCTCCT TGCAGGCGCC 
GCCGCCTGCA CGCCCAAGGC GGGCGGCCTT GCCTCCTCGC CTGTCGTGCC CGCACTGCCC 
GCGCCATGGG GCGCCGTGCC GCATCCGCGC CAGGTGAAAT GGCACGACCG GCGCATGTAC 
GCCTTCATCC ATTTCTCGAT GAACACCTTC ACCGACAAGG AATGGGGTTT CGGTGACGAA 
GACCCCGCCA TGTTCAACCC CACCGATTTC GACGCCGACC AGATCGTCGG CGCGGCGGTG 
GCGGGCGGAC TTACCGGCCT CATCATCACC GCCAAGCACC ACGACGGCTT CTGCCTCTGG 
CCCACCACGC TGACCGAACA CTGCGTGCGC AATTCGCCCT GGCGCGGGGG CAAGGGCGAT 
GTCGTCGGCG AACTGGAGGC CGCGTGCCGC CGCGCCGGGA TCAACTTCGG CGTGTATCTC 
TCGCCGTGGG ATCGCAACCG CGCCGATTAC GGCAAGCCGT CCTACGTCGA ATACTATCGC 
GCCCAGTTGA CCGAATTGTG CACCCGCTAT GGCAAGCTGT TCGAGGTGTG GTTCGACGGC 
GCGAACGGCG GCGACGGCTT TTATGGCGGC GCGCGCGAGA CGCGGCAGAT CGATGCGCCG 
AAGTATTACA ACTGGCCCGG CATCATCGAA CTCGTCCACT CGCTCCAGCC GGATGCCTGC 
ACCTTCGACC CGCTCGGCGC GGACATCCGG TGGGTCGGCA ACGAGGAAGG CCATGCCGGC 
GATCCCTGCT GGCCAACCAT GCCGAACGCG CCCTACGAAA TGGACAAGGG CTATACCGGC 
GTGCGCGGCG CGGAACTGTG GTGGCCGGCG GAAACCGATG TCTCGATCCG TCCCGGCTGG 
TTCTACCACG CCGACGAGGA CACCCAGGTC AAGACGCCGC AGAAGCTGAT GGAGATGTTC 
GACCGCTCTG TCGGCCATGG CAGCAACTTC CTGCTGAACC TGCCGCCCGA CCGCCGTGGC 
CGGATTCCCG ATCGCGACGT CGCCAGCCTC AAGGCCTTCG GCGATGCGAT CCGCGCCACG 
TTTGCGCAGG ATCTGGCGCG CGGGGCGCTT GCCAGTGCCA GCGCGGACAT CGGCTCCACC 
GCCGCCAGCG CCATCGACGG CAATCCCGAC ACGTTCTGGT GCGCGCCCGC CGAAGCGCGC 
GACGCCGCGC TCGCGCTGGA ACTCCAGCCC GGGACCCGGT TCGACACGAT CGTCTTGCGC 
GAATGGCTGC CGCTGGGACT GCGCACCACG ACTTTCGCCA TCGACATCGC CGACGACGGC 
GGCGAATGGC GCGAAATCGC GCGCAAGGAC ATGGTCGGCC CCGAACGCCA TGTCCGCCTG 
CCCGCGCCCG TCTCTCCGCG CCGTGTGCGC TTCCGTGCCA TCGCGGCAGA GGCAGGGCCG 
ACGCTGCGGG AATTCGCGCT CTACCTGTCG TCAGCGCCCA TCGAACTGCC GCCCGCGGTG 
CCTTCGGACC CCAGCATCGT CTCGCGCCGC CGCTGGAAGA TCGTGGCCGC CAGCGCACCC 
GGGGCCGATG CCGTGCTCGA TGAAAACCCG AAGAGCGCGT GGACAGCGCC CGCCACGGCT 
TCGCTGACCA TCGACCTCGG CGGGGAAGAG AAGCTCGCGG GCTTCACCCT GACGCCCACG 
CGCCACATCG ATCCGCAAGC CGCCCCGCCG GCGCGCTGGC ACGTCGAGAC GAGCCTCGAC 
GGCAAGTGCT GGAGCAAGGC GGAAGAAGGC GAGTTCCAGA ACATCAACTA TGCCCGCGCG 
ACGCAGCGCA TCGCCTTTTC CGCGCCGCGC AACGCCCGCT ACCTGCGCCT CGCCTTCCCG 
CGCCCGGCCG TGCCCGCACC GGCCATCGCC GTGGCGACAA TCGGTGCCTT TCGCTAG 

 

Protein sequence

MTLPALSRRT VLSGSLLAGA AACTPKAGGL ASSPVVPALP APWGAVPHPR QVKWHDRRMY 
AFIHFSMNTF TDKEWGFGDE DPAMFNPTDF DADQIVGAAV AGGLTGLIIT AKHHDGFCLW 
PTTLTEHCVR NSPWRGGKGD VVGELEAACR RAGINFGVYL SPWDRNRADY GKPSYVEYYR 
AQLTELCTRY GKLFEVWFDG ANGGDGFYGG ARETRQIDAP KYYNWPGIIE LVHSLQPDAC 
TFDPLGADIR WVGNEEGHAG DPCWPTMPNA PYEMDKGYTG VRGAELWWPA ETDVSIRPGW 
FYHADEDTQV KTPQKLMEMF DRSVGHGSNF LLNLPPDRRG RIPDRDVASL KAFGDAIRAT 
FAQDLARGAL ASASADIGST AASAIDGNPD TFWCAPAEAR DAALALELQP GTRFDTIVLR 
EWLPLGLRTT TFAIDIADDG GEWREIARKD MVGPERHVRL PAPVSPRRVR FRAIAAEAGP 
TLREFALYLS SAPIELPPAV PSDPSIVSRR RWKIVAASAP GADAVLDENP KSAWTAPATA 
SLTIDLGGEE KLAGFTLTPT RHIDPQAAPP ARWHVETSLD GKCWSKAEEG EFQNINYARA 
TQRIAFSAPR NARYLRLAFP RPAVPAPAIA VATIGAFR