Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2418 |
Symbol | |
ID | 3916737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2593789 |
End bp | 2596416 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640445173 |
Product | beta-mannosidase |
Protein accession | YP_497688 |
Protein GI | 87200431 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATCCGTC CGCTGCTGGG GGCTTTGCTG GCCACGGTTC CGGTCCTCGC CATGGCCGCG CCGCGCAGTG AAGTGCTGCT CGACAAGGGC TGGCAGGTGC GGCTCGATCC CGCAGACGCC GAAGCCGTGC GCGCGCACCC CAGGGCGGCG AAGTGGCTGC CTGCAACGGT CCCGGGCGTG GTTCAGGCCG ACCTGGTTGC GCACAAGGTG GTGGCCGACC CGTTCGTCGG CCTCAACGAG GCGCAGGTTC AGTGGGCCGG CCGTAGCGAC TGGATCTATC GACTGCCGCT GGAAGCCAAC GCGGCCCTGC TGTCGCGCGG GCATGTCGAA CTGGTGTTCG AGGGTCTGGA CACCTTTGCC ACGGTCACCG TCAACGGCAG CGAAGTGCTT TCGGCGGACA ATGCCCACCG CCGCTGGAGG GTGGACGTGC GCCACCTGCT GAAGCCCGGC GCGAACGAAG TGCTGATCCG CTTCCGCTCG CCGCTCAAGG TCCTGCAACC CAGGGTCCTG CCGCTGGAAA ACCCGCTGCC GGGCGAATAC GACAGCGTGT TCGGCGACGA GCCGGAAGGC CGCCAGACTT CGCCCTATAT CCGCAAGCCC AAGTATCACT ACGGCTGGGA CTGGGGCCCG CGCATCCTCA ACATCGGCCC CAACGGCCCG GTCCGGATCG AGGCATGGGA CGACGCGCGG ATCGACGTGG TGCGCGTGCA GCAGGAGGCG ATCTCCGCCG CCGAAGCCCG GATTGCCGCC GAGGTCGAAA TCGTGGCGGA CAAGGATGGC GAAGCGGAAG TTGGCGCAAG CGCGATCGGT CCGGATGGCG CGACGGCGGC CAGCGGCACG CGCAAGGTGC ATCTGGTGGC GGGACGCAAC CGCGTTCTGG TTCCGCTTGC CATAGCATCG CCGCGCCTGT GGTATCCCGC CGGGTTCGGC GACCAGCCGC TCTATTCCGT GCGCACCAGC CTCAAGGTGA AGGACGAAGT GGTGGACGGC GCGGTCCGGT CGACCGGCCT GCGCACGGTC GAACTGCTGC GGGAGGCCGA CGCCAACGGA CGCGGCTTCC AGTTGAAGAT CAACGGGTTG CCCATCTTCA TGAAGGGCGC GAACCTGATC CCCTTCGACA GCTTCCAGAC GCGCGTGACC ACGCAGCGCA TGGCCGCGAT CCTGGGCGAC GCCAAGGCCG CCAACATGAA CATGGTGCGC ATCTGGGGTG GCGGACACTA TCTGCCCGAC GCCTTCTACG ACGCCGCAGA CCGGCTGGGC CTGATGGTCT GGCAGGACTT CATGTTCGGC GGAGCGGTCA CGCCCCATGA TCGCGAGTTC CGCGAAAGCG TGCGGATCGA GGCGGAAGAG CAAGTCGACC GGGTGCAGGC CCATCCCTCC ATCGTGATCT GGGCGGGCAA CAACGAGGTG CTTTCCGGCT GGGAAACCTG GAGCGACCGC GTCGCCTTCA AGAAGCGCGT CGGCGCCGAC GAGCAGGAGC GCGTGGGCGT GGGCATGGCG ATCCTGTTCA ACCAGGTCCT GCGCGACGCG GCCGAGCGGC GCGATGCCGA CGTGCCGTAC TGGCCGGGCT CGCCTTCGAC CAACTACGAA GGCCGGCCCG ATGTCGACGG CGACGGCGAC CGCCATTACT GGGACGTCTG GGGCGGCAAG AAGCCGGTCG AGGCCTATCT CGAGACCTGC CCGCGCTTCA TGTCGGAATA CGGACTCCAG GCCATGCCGG TGATGCCGAC GATCCGCAGC TTTGCAGGAC CCGGCGATCT GGAGATCACT TCGCCGGTCA TGCGCGCCCA CCAGAAGTTC ATGCGGGGAC AGGGGCAGGA GCGCCTGCTG CACTACATCG AACAGCGCTA CCGGGCCCCG CGCGACTTTG CCGATTTCGT CTACCTGACG CAGGCCATGC AGGCCGACGG CATCGCGCTG GGCGCGCTGC ACCATCGCGC CTGCAATCCG GTCACCTCCG GCTCGCTCTA CTGGCAGCTC AACGATGTCT GGCCGGGAGC ATCGTGGTCG AGCGTGGACT ACTACGGGCG CTGGAAGGCA CTGCACTTCG CCGCGCGCCG CTTCTTCGCG CCGCTTGCCA TCGCGGCGGG CCGCAAGGCT GACGGTATGA CCGAGGTGAG CCTCGTGTCG GATCGCACCG CGCCGCTGGA CGCGCAGTGG CGGCTGCGGA TCGTGAGCGT CGAGGGCAAG GAACGCGTGG TCGGCGGCGG CAATGCCACG GTCGCGCCGC TTTCGGCCTC GCGGGTCGGC ACGTTCGACG ATGCCGCGCT GTTCGGAAGC GACGACAAGC GCACCAGCTT TGCCGTGGCG GAGATGCTGG TGGACGGCAA GGTCGTATCC CGCGCGCTGG TTTCGGCGCT GCCGGAAAAG GCGATGGCCC TGCCCGACCC GGGGCTGACG ACCGCGTGGA CCACCGCTCC GGACGGCAAG CCGCGCCTCA CGGTAACGGC GGCGCGTCTT GCGCGCGGAC TTTGGATCGG GTTCGGTGCG CTCGACGCGA GCGCCTCGGA CAACTTCGTC GACCTGCTGC CGGGCGAGAG CGTGACGGTG GAGGTGACGT CCAAGGCTTC ACCCGCCGCG CTGCGCAAGG CGCTGGAACT GCGCCATCTG GGCGAGAGCC GGCGATGA
|
Protein sequence | MIRPLLGALL ATVPVLAMAA PRSEVLLDKG WQVRLDPADA EAVRAHPRAA KWLPATVPGV VQADLVAHKV VADPFVGLNE AQVQWAGRSD WIYRLPLEAN AALLSRGHVE LVFEGLDTFA TVTVNGSEVL SADNAHRRWR VDVRHLLKPG ANEVLIRFRS PLKVLQPRVL PLENPLPGEY DSVFGDEPEG RQTSPYIRKP KYHYGWDWGP RILNIGPNGP VRIEAWDDAR IDVVRVQQEA ISAAEARIAA EVEIVADKDG EAEVGASAIG PDGATAASGT RKVHLVAGRN RVLVPLAIAS PRLWYPAGFG DQPLYSVRTS LKVKDEVVDG AVRSTGLRTV ELLREADANG RGFQLKINGL PIFMKGANLI PFDSFQTRVT TQRMAAILGD AKAANMNMVR IWGGGHYLPD AFYDAADRLG LMVWQDFMFG GAVTPHDREF RESVRIEAEE QVDRVQAHPS IVIWAGNNEV LSGWETWSDR VAFKKRVGAD EQERVGVGMA ILFNQVLRDA AERRDADVPY WPGSPSTNYE GRPDVDGDGD RHYWDVWGGK KPVEAYLETC PRFMSEYGLQ AMPVMPTIRS FAGPGDLEIT SPVMRAHQKF MRGQGQERLL HYIEQRYRAP RDFADFVYLT QAMQADGIAL GALHHRACNP VTSGSLYWQL NDVWPGASWS SVDYYGRWKA LHFAARRFFA PLAIAAGRKA DGMTEVSLVS DRTAPLDAQW RLRIVSVEGK ERVVGGGNAT VAPLSASRVG TFDDAALFGS DDKRTSFAVA EMLVDGKVVS RALVSALPEK AMALPDPGLT TAWTTAPDGK PRLTVTAARL ARGLWIGFGA LDASASDNFV DLLPGESVTV EVTSKASPAA LRKALELRHL GESRR
|
| |