| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2383 |
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| Symbol | |
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| ID | 3915728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2544608 |
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| End bp | 2546482 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640445138 |
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| Product | hemolysin activation/secretion protein-like |
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| Protein accession | YP_497653 |
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| Protein GI | 87200396 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.418836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATC GTCTTGGTGC GCAGCCCGAT TTCGGGGCAG TTTCGGTCGT TCCGGTCAGG
AGCGTTGGGC GTGGTGCGCA ATGGCTGCGC GGGCGCAGCG CATTGCTGCT GGTCGCGAGT
GGCGTTGCGT GGTCCGCAAT GGCTTCGGCG CAGACCGTGC CGCCGCAGGG CGTGCAGCCG
CCGACGCGCG AGGAGATCGA GCGCGGCGTT GCCGAGGGTA CGCTGAAGCG TGGCGGGCCG
GTTTCGGTCG ATACATCCGA AGTTGAACGG GCCCCGTGCC CGCTGGCTGC CCCCGACTTC
GCGGGCATCC GCCTGAAGCT GCATTCGGTG ACGTTCACCG GCATGCAGGA AATTCCCGGC
TTCGACCTTT CCGGCAGCTA TGCCGAGTTC GTCGGGACCG ACCAGCCGGT CGCCGTGATC
TGCGAGATCC GCGACCGGGC GGCGACTGCG CTACGCCAGG CGGGCTATCT TGCCGCGGTG
CAGGTGCCGC CGCAGAAGAT CGAGGGCGGG GCGGTCCGGC TCGACGTGCT GCTGGCGCAT
CTCAAGCGGG TTCAGATCAA GGGCGATGCA GGGGCTTCGG AAGGTATCCT TCTGAAGTAC
CTGAACAAGC TGACGCGCGA TCCGGTTTTC AACACGCACG AGGCAGAGCG CTATCTTCTG
CTCGCCAAGG ACGTGCCGGG TCTCGACGTG CGCATGGCCC TTCGGCCGGT CGAAGGTGCG
CCGGGCGAGG TGATCGGCGA AGTGTCCGTG CGCCGGGTGC CGGTCTATGC CGAGCTTGGC
TTGCAGAACT ACGGTTCGCG GGCGGTGGGG CGCTACAGCG GTCTGGCGCG GGTCCAGATC
AACGGCCTGA CGGGCCTTGG CGATGCGACA ACGGCAAGCT TCTTCGCGAC GACCGACCTG
GAGGAGCAGA AGGTCCTGCA GATCGGTCAC GAAATGCGCC TTGGCGGGGA AGGCTTCTCG
CTGCGGGGCG ATTTCACCTA TGGCTGGACC AATCCGACGG TGACAGGGGC CGCGTCGGAC
TTCCACTCGC GGACGCTGTC TGCATCGCTG GAAGGAAGTT ACCCGGTGGT CCGGTCGCAG
GCCTACAACA TGGCCGTGTC GCTCGGTGCC CAGATCGCGG ACCAGGATCT CGATTTCGGG
AAGATACCGC TCAACCGCGA CAGACTGCGC GTGCTCTATG CGCGGGTCGA TACCAACGGC
GTTTCCCGGA AAAGCCTGAC CGGCCGCGAC GGCTTCACAC CGTTCGAACC GCATTGGGCC
TGGGGACTTT CGCTCGAGGC GCGCCAGGGG ATCGACGTGT TCGGGGCGAC GAAGGGTTGC
CAGGGCGCGC TGGCGCCGAC CTGCACGGGT TTCGGCAAGG TCACGCCCAG CCGCATCGAG
GGCACGGCCA AGGGCTTTGT CCTGCGCGCT GCGGGCGTGC TCGACTATCG CCCGGTTCGC
GGCCTGACGT TGAGCGTCCA GCCGCGGGCG CAGTGGTCGC CGGACAAGCT TCTGTCGTAT
GAGGAGTTTT CGGGCGGCAA CTATACCATC GGCCGAGGTT ACGATCCGGG CGCGGTGATT
GGCGACAGCG GGGTTGGGGT GCGCGGCGAG GTTCGCGTCG GGTCCTTGCT GCCCAAGGTC
GCGGGCGGGA ACGCGATCCA GCCCTATGCC TTCGCCGATG CTGCATGGGT CTGGAACAAC
GACACCGCGT TCGACGGGCT CGACCCGCAG AAGGTCGTGT CGGTGGGCGG GGGCCTGCGC
GCCGCGATCC ACGATGCGTT GCGCCTCGAC GCCGGGGTGG CCGTGCCGCT GCACGATCCG
CTCGGCCTGA ATGTGAAGGG CAAGGCCCGG TTCATGCTCA ACCTTTCGTT CCAGCTCCTG
CCGTGGAGGC TGTAA
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| Protein sequence | MSDRLGAQPD FGAVSVVPVR SVGRGAQWLR GRSALLLVAS GVAWSAMASA QTVPPQGVQP
PTREEIERGV AEGTLKRGGP VSVDTSEVER APCPLAAPDF AGIRLKLHSV TFTGMQEIPG
FDLSGSYAEF VGTDQPVAVI CEIRDRAATA LRQAGYLAAV QVPPQKIEGG AVRLDVLLAH
LKRVQIKGDA GASEGILLKY LNKLTRDPVF NTHEAERYLL LAKDVPGLDV RMALRPVEGA
PGEVIGEVSV RRVPVYAELG LQNYGSRAVG RYSGLARVQI NGLTGLGDAT TASFFATTDL
EEQKVLQIGH EMRLGGEGFS LRGDFTYGWT NPTVTGAASD FHSRTLSASL EGSYPVVRSQ
AYNMAVSLGA QIADQDLDFG KIPLNRDRLR VLYARVDTNG VSRKSLTGRD GFTPFEPHWA
WGLSLEARQG IDVFGATKGC QGALAPTCTG FGKVTPSRIE GTAKGFVLRA AGVLDYRPVR
GLTLSVQPRA QWSPDKLLSY EEFSGGNYTI GRGYDPGAVI GDSGVGVRGE VRVGSLLPKV
AGGNAIQPYA FADAAWVWNN DTAFDGLDPQ KVVSVGGGLR AAIHDALRLD AGVAVPLHDP
LGLNVKGKAR FMLNLSFQLL PWRL
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