Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2356 |
Symbol | |
ID | 3915701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2502950 |
End bp | 2504809 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640445111 |
Product | hypothetical protein |
Protein accession | YP_497626 |
Protein GI | 87200369 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.805345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCACTGA CGCGTCGCGT TTCGACCTGC GCGATCGCAC TGGCGATCAT CCTTGCCGGG TGCGCACCGG CGACGGCCCG GACAGGCGCT TCGGCCGACA CGATACCGAC TGCCCGGATC GACGCGGCAC CGCCTCCCCT GCCCGTCACT TCGGCCAACG TGGCGCTGGA CCGCCTGTTC GCGGAAGATG CGCAAGTCTC GATGCAACTC GACCCGCTCG GCTCGCTGGA GCAGGGACAC AAGGTCCCGG TCGAGCGGTT CGTGCTGCTG TTCACCCCGG AACTCATCCG CGAACGGCGC GAGGCGAATG CCCGGTCCCT GGCCGAGCTG GCCAGGATCG ATCCGGCAAA GCTCGATCGC AACCGCCGCA TCTCGCGCGC AGTATTCGAG GATGCAAAGC GGAACGAACA GGCGCTTCTC GCACCCGACG TCCAGCCACT TTTCGCGGCG CAGCCCTTCA ACCACTTCGG CGGCTTCCAT GTCGCCTATC CGGAGCTTTC CGCACCGGGC AGCGGCATCG CACTCGACAC GGTCGAGGAT TATCGGCTGC TCATTGCGCG GCACAAGGCA CTGCCGCAGG TCTTCGGCCA GGCCATCGCC CGGTTCCGGG AAGGCATGGC CAGCGGGGTT ACCGAGCCTC GGCTGACAGT CGACAACATG ATCGTGCAGA TCGACGCGCT GCTGGCCCAG CCGGTAGACC GTTCGCCATT CCTGGCTCCT GCGCGGCAGT TTCCGGACGA TGTGCCGGCA GCCGAACGCG CCAGGCTGGC GCGGGAGCTG GCGACGGTGG CGCGGCGCGA GATCTATCCG GCCTATCGGA CGCTGCGCCG CTTCCTAGCC AACGAATACC GGCCCGTGGC GCGCGAGCAG GTCGGCCTTT CGGCGCTTCC AGACGGCGAA CGGCTATACC GACTGCTGGC GCGGCAGCAT ACCACTGTGG ACCTCGACCC GGCGGCGGTG CACGAACTGG GTCTATCTGA GGTGGCACGC ATCCAGTCCG AAATGGAGGA CGTGAAGCGC CAGCTCGGTT TCCAGGGCCC GCTGCGCAGC TTCTTCGACC ACATCCGGAC CGACCCGAAG TACCACCCGC ACACGGAGCG GGAACTGGCG GAGGGGTTCC GCGCCGTGGG CCGCAAGGTC GACGCGCTGG CGCCGCAGTA CTTCCTGCAC CTGCCCCTCA CACCGCTGCT GATACAGCCC TACCCCGCCT ACCGCGCACG GTTCGAGGCA GGCGGCAGCT ATGCGCAGGG ATCGGCTGAC GGGAAGCAAC CCGGCGTATT CTTCTACAAT ACCTATGACC TGAAGAGCCG CTTCCTGACC GGCGTTACCA CGCTCTATCT CCATGAAGGC GCGCCGGGGC ATCACTTCCA GATCAGCCTG GCGCAGGAAA ACGCGAACCT CCCGGACTTC CAGCGCTTTG GCGGCAACAC GGCCTATATC GAAGGCTGGG CGCTCTATGC GGAGACGCTG GGCTACGAGA TGGGGTTCTA CAAGGACCCG ATGCAGCACT GGGGCACGCT CGACGACGAA ATGCTGCGCG CGATGCGGCT CGTCGTGGAC ACCGGCCTTC ACACCAGGGG ATGGAGCCGA GAAGAAGCGG TCGATTACAT GCTGGCCAAT TCCGGCATGG GCCGCACCGA TGCGCAGGCC GAAGTCGACC GCTACATCGC CAACCCGGGT CAGGCGCTGG CCTACAAGAT CGGAGCGCTG ACGATCCAGC GCCTGCGCCG GGAAGCGGAG GCGGCACTGG GCCGGCGCTT CGACATCCGC CAGTTCCACG ACCAGATTCT GGGGAGCGGC GCGCTGCCGA TGCCGGTTCT CGAGGCCAAG GTGCGGGGTT GGATCGCCGC CACGCGTTGA
|
Protein sequence | MALTRRVSTC AIALAIILAG CAPATARTGA SADTIPTARI DAAPPPLPVT SANVALDRLF AEDAQVSMQL DPLGSLEQGH KVPVERFVLL FTPELIRERR EANARSLAEL ARIDPAKLDR NRRISRAVFE DAKRNEQALL APDVQPLFAA QPFNHFGGFH VAYPELSAPG SGIALDTVED YRLLIARHKA LPQVFGQAIA RFREGMASGV TEPRLTVDNM IVQIDALLAQ PVDRSPFLAP ARQFPDDVPA AERARLAREL ATVARREIYP AYRTLRRFLA NEYRPVAREQ VGLSALPDGE RLYRLLARQH TTVDLDPAAV HELGLSEVAR IQSEMEDVKR QLGFQGPLRS FFDHIRTDPK YHPHTERELA EGFRAVGRKV DALAPQYFLH LPLTPLLIQP YPAYRARFEA GGSYAQGSAD GKQPGVFFYN TYDLKSRFLT GVTTLYLHEG APGHHFQISL AQENANLPDF QRFGGNTAYI EGWALYAETL GYEMGFYKDP MQHWGTLDDE MLRAMRLVVD TGLHTRGWSR EEAVDYMLAN SGMGRTDAQA EVDRYIANPG QALAYKIGAL TIQRLRREAE AALGRRFDIR QFHDQILGSG ALPMPVLEAK VRGWIAATR
|
| |