Gene Saro_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2330 
Symbol 
ID3915675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2476130 
End bp2477185 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content67% 
IMG OID640445086 
Producthypothetical protein 
Protein accessionYP_497601 
Protein GI87200344 
COG category[V] Defense mechanisms 
COG ID[COG2348] Uncharacterized protein involved in methicillin resistance 
TIGRFAM ID[TIGR03019] FemAB-related protein, PEP-CTERM system-associated 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.1528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC CGTTCGTGCC TTCGCGCGTG GTGGCGCGAC TGGCCGATCC CGGGGAGCGC 
CCGGCAGTTG CGCGATTCCT CGACGCGCAT CCCGATGCAA CGGTGTTCCA TCGCGCCGCA
TGGCTCGATG CGGTCGAACA ATCGACCGGG CATCGGACGC ATGTCCTGGT ATCCGGGCAA
GACGAAGCGA TCCGCGCGGT TCTGCCCCTG CACGAAGTCC ATTCCCCGCT GTTCGGACGG
GCACTGGTTT CGACCGGCTT CGGCGTCGGC GGCGGAGTCG TCGGCAAGGG CGATGCGGCT
CTGTTCGCGG CGGCACAGGA ACTTGCCGTG CGGCTGAACT GCCCCACCGT CGAACTGCGC
GGCGGTCCCT TGCCACAGGG AGATGGCTGG CACGTGAAGA CCGACAGCCA CGCAGGCTTC
GTCACGCCGC TTGCCGCCGA CGACGAGGCG CAATTGCTGG CCATTCCGCG CAAGCAGCGC
GCCGAAGTGC GGCGTGGGCT GGGCTACGGG ATGGAAGTGC GCACCGGCCG TTCGCCCGAG
GACAGGGCAA TGCATCATGC GGTCTACGCG CAATCCGTGC GAAACCTCGG CACCCCGGTG
TTTCCGCGCC GTCTGTTCGA CGCCGTGCTC GACGGTTTCG GCGATGATGC CGACATTCTG
ACCGTCCTGC ACGAAGGCAG GCCGCTTGCC TCGGTGTTGA GCCTTTACCA TCGCGGCGCG
GTGATGCCCT ACTGGGGCGG AGGCACGTTC GAGGCGCGGG CCATGCGCGC GAACGATGTT
ATGTACTACG CGCTGATGAA CCATGCGCGG GCGCGTGGGT GCGACCGTTT CGATTTCGGT
CGCTCCAAGG TCGATTCCGG TGCCTATCAT TTCAAGCGCA ACTGGGGCTT CGCGCCGCAG
CCGCTCTCCT ACGCACACTG GACCGCCGAC GGGCAGGCCC CGCGCGACGT CAATCCGCTC
AGCCCGCGCT ACCGGGCAAG GATCGCACTG TGGCAGAAGC TACCGCTGGC GGTGGCGAAC
CGGCTCGGCC CGATCATCGC GAACGGCCTT GCATGA
 
Protein sequence
MNAPFVPSRV VARLADPGER PAVARFLDAH PDATVFHRAA WLDAVEQSTG HRTHVLVSGQ 
DEAIRAVLPL HEVHSPLFGR ALVSTGFGVG GGVVGKGDAA LFAAAQELAV RLNCPTVELR
GGPLPQGDGW HVKTDSHAGF VTPLAADDEA QLLAIPRKQR AEVRRGLGYG MEVRTGRSPE
DRAMHHAVYA QSVRNLGTPV FPRRLFDAVL DGFGDDADIL TVLHEGRPLA SVLSLYHRGA
VMPYWGGGTF EARAMRANDV MYYALMNHAR ARGCDRFDFG RSKVDSGAYH FKRNWGFAPQ
PLSYAHWTAD GQAPRDVNPL SPRYRARIAL WQKLPLAVAN RLGPIIANGL A