| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2329 |
|---|
| Symbol | |
|---|
| ID | 3915674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2474901 |
|---|
| End bp | 2476133 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640445085 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_497600 |
|---|
| Protein GI | 87200343 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR03087] sugar transferase, PEP-CTERM/EpsH1 system associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.285822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG TCCTGTTTCT CGCCCATCGC ATCCCGTTCC CGCCCGACCG GGGCGACAAG
ATCCGTTCGT GCCACGTGCT GCGCCATATC GCCGGCCTCG CGCCCGTCCA CGTCGCCTGC
TTTGCCGATG ACGAGGGCGA TATGGCGCAT GAGCCGGACC TTGCGGCGAT CGCGGCCAGC
CACTGCCTGA CCCCACGAAC GCGCTCGCTG CCGCTGGCGG GGGTAGATGC CCTCGTGCGT
GGCAAGCCCG TCAGCCTGAC CGCCTTTGCC GACAGGCGGC TGGCGGCCTA CGTCGCCCGC
GTTCTCGACG AGCGACCGAT TGGCGCGATT TACGTCTTGT CCGGGCAAAT GGCGCAGTAC
GTGCCCGCCC GGTTCGCGGG CCGCGTCGTC ATGGATTTCG TCGATGTCGA TTCCGCCAAG
TTCGAAGCCT ATGCCGCTGC CGCGCGTTTC CCCGCCAGCC TGCTCTACGC CCGCGAGGCG
CGCCTGCTTT CGCGCTTCGA GGATGCCGTG GCCCGCCGCG CGCACGCCAG CCTTCTGGTC
ACGCCCGAGG AAGCCGCGCT CTTTCGCCAG CGCCTCGCGC CCGGTGCGGA GCCGGCGGTC
ATTTCGCTGG GCAACGGCAT CGATACCGAT TTCTTCGACC CGGAAGGGAT GTCCCCCGCG
CCCGAGACGG TGGGCGCGGG ACCGCAGCTC ACGTTCACCG GCCAGATGGA CTACCCGCCC
AACGTAGCCG CCGTGGAGAT GTTTGCCCGG GCCGTCATGC CCCAGGTGCG CGCCGTGTTT
CCCCAGGCGC GCTTCAACGT CGTCGGCCGT GCGCCGACCC TGGCGGTGCG TTCGCTCGAT
GGCGTGAACG GGACTCGCGT GACCGGCGCC GTCCTCGACG TGCGCCCGTG GCTTGCCGGG
GCCGACCTCG TCGTCGCACC GCTCACCATC GCGCGCGGGG TGCAGAACAA GGTGCTCGAG
GCCATGGCCA TGGCCCGCCC GGTGCTTGCC ACGCCCGAAG CCGCAACAGG GATCCCGGCG
CGCGAAGAAC ACGAGCTGGT CGTCGCCGAT GGCGCCGAGG CGCTGGCCAA GGCCGCGCTT
TCCCTGCTCC ACGACAAGGT CCGCGCCGCC ACCATCGGGC ATTCCGCCCG CGCCATCGTG
GTGGAGCGGT GCGGCTGGGC GGGCGTCCTC GCTCCGCTCG CCGGCCTGCT CGGCCTGCCC
CGCCACCCGG AGGCGCCGCG TGTCGCCGCC TGA
|
|---|
| Protein sequence | MSEVLFLAHR IPFPPDRGDK IRSCHVLRHI AGLAPVHVAC FADDEGDMAH EPDLAAIAAS
HCLTPRTRSL PLAGVDALVR GKPVSLTAFA DRRLAAYVAR VLDERPIGAI YVLSGQMAQY
VPARFAGRVV MDFVDVDSAK FEAYAAAARF PASLLYAREA RLLSRFEDAV ARRAHASLLV
TPEEAALFRQ RLAPGAEPAV ISLGNGIDTD FFDPEGMSPA PETVGAGPQL TFTGQMDYPP
NVAAVEMFAR AVMPQVRAVF PQARFNVVGR APTLAVRSLD GVNGTRVTGA VLDVRPWLAG
ADLVVAPLTI ARGVQNKVLE AMAMARPVLA TPEAATGIPA REEHELVVAD GAEALAKAAL
SLLHDKVRAA TIGHSARAIV VERCGWAGVL APLAGLLGLP RHPEAPRVAA
|
|---|
| |