Gene Saro_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2178 
Symbol 
ID3918843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp2321554 
End bp2322195 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content62% 
IMG OID640444933 
Productputative phage repressor 
Protein accessionYP_497451 
Protein GI87200194 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0386181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACG CACGCAGAGC CCTGGACGAA CTGATCCAGC AACGAGGGGT GAATTACTCC 
TCGGTTTCGC GCCTGCTGGG GCGCAATGCC GCTTACATCC AGCAGTATAT TCGGCGCGGC 
AGTCCGCGGC AGTTGGACGA GCAGGATCGC TCGGTCCTGG CGCGATTTTT CGGAGTCGAT 
GAGAAGGTCC TTGGAGCCCC TGCCCGCCGC TCAGGCCCGG TGGTAGAGTT GGTCCATGTA 
CCTTTGCTCA ATGTCGAGGC ATCAGCCGGC CATGGCGCTC TGGCCGAAAT GGAAGCCAAA 
TCCGCGCAGT TCGGCTTCGA CGAGAAGTGG CTGCGCCGAC TGACCGCGAG CAAGGCGTCG 
AGCCTGTCGA TTATCGCGGT CCATGGGGAC TCGATGGAGC CCACCCTCCA CGATGGCGAC 
GAGGTGATGG TCGATCTCGG GGATGGCCAG TCGCGGCTGA GAGACGGGAT CTATGTCCTG 
CGGATGGATG ACATGCTGAG CGTCAAGCGG ATTGCCCTCG AACCACAGGG CAAACGCGCG 
TCGGTCCTGA GCGACAACCC TGCCTATCCA AGCTGGCGCG GCCTCGAGAA ACGCACGCTT 
AACATCGTCG GACGGGTTCT CTGGTTCGGA CGGGCGCTCT AA
 
Protein sequence
MDDARRALDE LIQQRGVNYS SVSRLLGRNA AYIQQYIRRG SPRQLDEQDR SVLARFFGVD 
EKVLGAPARR SGPVVELVHV PLLNVEASAG HGALAEMEAK SAQFGFDEKW LRRLTASKAS 
SLSIIAVHGD SMEPTLHDGD EVMVDLGDGQ SRLRDGIYVL RMDDMLSVKR IALEPQGKRA 
SVLSDNPAYP SWRGLEKRTL NIVGRVLWFG RAL