| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2148 |
|---|
| Symbol | |
|---|
| ID | 3918813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2290448 |
|---|
| End bp | 2291650 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640444903 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_497421 |
|---|
| Protein GI | 87200164 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTC GATATTTGAT CGCCACCGCC ATTCTACTGG CCGGTTCACC CGCCTGGGCG
GCCGAGGTCT CACTGACTGA CGCGCTTTCC CAGGGCGCTC AGAATTCGCC GCGCGTGGCG
CAGGCCCGCG CCCAGGCGCA GGCAGCCGAA GCGAGGGCTC GGCAAGCCGG CGCATCGCCC
AACCCGGAGA TCTCGCTCGA GGTCGAGAAC TTCGCCGGCA CCGGGCCCTA TCGCGACACG
CGCAGCGCCG AGACGACGCT GGCGCTCAGC CAGCGGATCG AACTGGGGGG CAAGCGCAGT
GCGCGCATTG AGGTCGCCGG AGCCGAACGG GATTTCGCGC TCGTTGCGCT GAAACGCGCG
GAAGCCGATC TCGCGCGCGA CATTCGGATC GCCTTCGCCG AATTACGTGC GGCGGAGGAT
CGGGCGGTTC TTGCCCGCGA CAATGTCCGG CAGGCGGAGG AACTGGCGCG CTCTGCCGGA
TTGTTCGTGG AGGTCGGACG CGATCCGCCT TTGCGCAAGC TGCGTGCCGA CGCCCTGCTC
GCAGACGCCA AGGCAGAACA GGCACGCACC TTCGGCGAAT TGCTTGCCGC CCGCCGCCTG
CTCGCGGACC TCATCGGCAC CAGCGACCCG GAGCTCTCCG CAAACGTCGA TGGCGATGAC
ACGCGACCTG CGCTGCTGCC GCCCGAAACG CCATCGCTCG ACGAGCAATT GGCGGCGGCG
GAACGCGATG CGGCGCGGGC GCGCATTCGG GTGGCCAAGG CAGTTGGCGT CCCTGACGTC
ACTGCGAGTG GCGGCGTGCG GCGGATCAAC GACGGGCGCG AAACCGCATT CGTGGCGGGC
TTCTCGATCC CCCTGCCGAT CCGGGACCGT AACCGCGGCA ACATCGAGGC AGCGAGTGCG
GACAGTCTGG CTGCAGAGGC TGCACTGTCG CAGACGCGGC TCGATGCTAG GCGCGCCCAG
CATGACGCCC GAATGCTGCT CGGCGCGGCG GAAGAGCGGG TGGCGGCCTT GTCCGGCCCC
GCTTTGACAC AGGCCGAGGA AGCCTTGCGT CTGGCCCAGG TTGGGTACGC CGCCGGCAAG
TTCAGCCTCA TCGAACTCAT CGACGCGCAG GCGGCGCTCA CCGCCACGCG CAAATCCCTG
ATCGACGCGC GGCTCGACCG CGCCCGCGCG CTGGCCGCGC TGATCCGCGC CAACGCGCAG
TGA
|
|---|
| Protein sequence | MKLRYLIATA ILLAGSPAWA AEVSLTDALS QGAQNSPRVA QARAQAQAAE ARARQAGASP
NPEISLEVEN FAGTGPYRDT RSAETTLALS QRIELGGKRS ARIEVAGAER DFALVALKRA
EADLARDIRI AFAELRAAED RAVLARDNVR QAEELARSAG LFVEVGRDPP LRKLRADALL
ADAKAEQART FGELLAARRL LADLIGTSDP ELSANVDGDD TRPALLPPET PSLDEQLAAA
ERDAARARIR VAKAVGVPDV TASGGVRRIN DGRETAFVAG FSIPLPIRDR NRGNIEAASA
DSLAAEAALS QTRLDARRAQ HDARMLLGAA EERVAALSGP ALTQAEEALR LAQVGYAAGK
FSLIELIDAQ AALTATRKSL IDARLDRARA LAALIRANAQ
|
|---|
| |