Gene Saro_2115 details

Gene Information

• Locus tag: Saro_2115
• ID: 3917763
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2254216
• End bp: 2254830
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640444868
• Product: 50S ribosomal protein L25/general stress protein Ctc
• Protein accession: YP_497388
• Protein GI: 87200131
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGA CGCTGCATCT GTCGGCCGAG ACGCGCGATC GGGCAGGCAA GGGAGCCTCC 
CGTGCACTGC GTCGCGAAGG CCGCACCCCC GCCGTGATCT ATGGCGGCAA TGAAGAACCG 
GTTGCGATCC ACCTGGAAGA AAAGGCGCTG GTCAAGGCGC TGGGCACCGG CCACTTCTTC 
AACTCGGTCG TCGAACTCAC CGTGGGCGGC CAGACCGTCC GTACCCTTCC GAAGGACGTC 
GCCTTTCACC CGGTGACCGA CCGTCCGGAG CACGCAGACT TCCTGCGCGT CTCGAAGGAC 
TCGGTCGTCC ACGTGAACGT CCCCGTCATC TTCGCGAACG AAGAAAAGTC GCCCGGCCTG 
AAGAAGGGCG GCGTGCTCAA CATCGTTCGT CACGAACTCG AACTGGTCTG TGCGCCTGAC 
GCGATCCCCG ACGACATCGT CATCGACGTC GCCGGCTACG AAGTGGGCGA TTCGATCCAC 
ATCAGCGCCG TCAAGCTGCC GGCTGGCGTG AAGTCCGCGA TCACCGACCG CGATTTCACC 
ATCGCGACGA TCGTGGCCCC CTCCTCGCTG AAGAGCGAAG AAGGCGACAC CACCAAGACC 
GACGCCGAGG GCTGA 

 

Protein sequence

MSETLHLSAE TRDRAGKGAS RALRREGRTP AVIYGGNEEP VAIHLEEKAL VKALGTGHFF 
NSVVELTVGG QTVRTLPKDV AFHPVTDRPE HADFLRVSKD SVVHVNVPVI FANEEKSPGL 
KKGGVLNIVR HELELVCAPD AIPDDIVIDV AGYEVGDSIH ISAVKLPAGV KSAITDRDFT 
IATIVAPSSL KSEEGDTTKT DAEG