Gene Saro_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2080 
Symbol 
ID3917728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp2218570 
End bp2219169 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content64% 
IMG OID640444833 
Producthypothetical protein 
Protein accessionYP_497353 
Protein GI87200096 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0320169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACT GGATCATCCA CCTCATCGAA GGCGGTGGCT ATTGGGGCAT CGCCTTCCTG 
ATGGTCATCG AGAACGTGTT TCCGCCGATC CCGTCGGAGG TCATCATGGG CCTGGGCGGG 
ATTGCGGTGG CGCGCGGGCG GATGGAGTTC TGGCCGCTGA TGCTCGCGGG AACCGTGGGT 
TCGACCGCCG GAAACTATTG CTGGTACCTG CTCGGGCGGA CGCTGGGCTA TGAACGCCTG 
AAGCCTTTCG TGAACCGCTT CGGCCGCTGG CTGACGGTGG AGTGGGACGA CGTCGAGGCC 
ATCGTCCGCT TCTTCCGGCG CCACGGGCAG TGGGTGGTGT TCGCGGTGCG CTTTGCTCCG 
TTCATGCGCA CGATGATCTC GCTTCCAGCC GGCCTGACGC GAATGGGCCA TGGGCGGTTC 
CTGCTGTTCA CCTTCGCGGG AGCAGCGATC TGGAACGCGA TCCTTGCCGG CGCAGGGTTC 
TATCTCGGGC GCAACTTCGG CGATCTTGAA AAGTACACGG GGCCGGTGGC GACGGGCACG 
CTGGTCGTGG TGCTGATCGC CTATGTGTGG CGCGTCATCG TATGGAAGCC CAGAGGCTGA
 
Protein sequence
MNDWIIHLIE GGGYWGIAFL MVIENVFPPI PSEVIMGLGG IAVARGRMEF WPLMLAGTVG 
STAGNYCWYL LGRTLGYERL KPFVNRFGRW LTVEWDDVEA IVRFFRRHGQ WVVFAVRFAP 
FMRTMISLPA GLTRMGHGRF LLFTFAGAAI WNAILAGAGF YLGRNFGDLE KYTGPVATGT 
LVVVLIAYVW RVIVWKPRG