Gene Saro_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2063 
Symbol 
ID3917710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2202886 
End bp2204040 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content65% 
IMG OID640444815 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_497336 
Protein GI87200079 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCCC TTGCCCTCTA CGTCCACTGG CCGTTCTGCC TCGCAAAGTG CCCTTATTGC 
GACTTCAACA GCCATGTGCG CGCGCGGACC GACATCGCAG CGTGGCAGGC CGCGCTGCTG
GCGGACATGC GACATGAAGC TCGGTTGACG CCGGGACGGC CGCTCTCCTC GATCTTCTTC
GGAGGCGGTA CGCCATCGCT CATGCCGCCC GCGCTGGTCG AGGCATTGCT CGCCGAAGCA
GAGCGGCTCT GGGGCTTTGC CCCGGGCATC GAGATCACGC TGGAGGCGAA CCCAAGTTCG
GTCGAGGCCG CAAACTTCGC GGCCCTGTCC AGCGCCGGAA TCAATCGCGT CTCGCTTGGC
CTTCAGGCGC TCGACGACAA CACCCTGAAA TTCCTCGGTC GGCTGCATGA CGTCAGCGAA
AGCCTTGCCG CGCTGGATCT TGCCCAGACC CATTTCGGCC GTGTCAGCTT CGACCTCATC
TATGCCCGCC CCGGCCAGAC CCCGGCGCAG TGGGAAGCTG AACTCAAGCG CGCTTTAGGC
TTCGGAACCG GCCACCTCTC GCTCTACCAG CTCACCATCG AGCCCGGCAC CCGCTTCGCC
ACGCTCGTCC GCGAAGGCAA GCTCGCCCCT CTCGACGACG ACGAGGCGGC CGACCTCTTT
GCCCTGACCC GGGAGCTGAC CTCCGCTGCC AGCCTGCCCG CCTACGAGAC CAGCAACCAT
GCCCGCCCCG GCGAGGAAAG CCGCCACAAC CTGACCTACT GGCGCTACCA GGACTACATC
GGCATAGGAC CTGGCGCCCA TGGCCGGAGG CTTGGCGCGG CGACCGTGCG GCACAAGAAA
CCCGAGAACT TTCTCCGCGC GGTTTCCGAA CATGGCCAAG GCATTGTCGA AGAACGACAA
CTTACCCCGT CCGAACAGGC GATCGAAGCC GTGCTCATGG GTCTGCGCCT TGCCGAGGGC
ATTTCCCCGC CGGCGCTCGC CGCCCGCTTC GGCTTTGCGG AGGACGAAAT GATCGACCGG
CGCAATCGCG AATCCTTCGC AAGAATGGGG TACCTGAACG ACACCGAAAC ATGCCTGAAG
GTGACCGAAC AGGGCGCGCC GGTGCTGGAA GCGTTGCTGG CCGACCTCGT GACCGACACG
ATCATCGCCG CATGA
 
Protein sequence
MQPLALYVHW PFCLAKCPYC DFNSHVRART DIAAWQAALL ADMRHEARLT PGRPLSSIFF 
GGGTPSLMPP ALVEALLAEA ERLWGFAPGI EITLEANPSS VEAANFAALS SAGINRVSLG
LQALDDNTLK FLGRLHDVSE SLAALDLAQT HFGRVSFDLI YARPGQTPAQ WEAELKRALG
FGTGHLSLYQ LTIEPGTRFA TLVREGKLAP LDDDEAADLF ALTRELTSAA SLPAYETSNH
ARPGEESRHN LTYWRYQDYI GIGPGAHGRR LGAATVRHKK PENFLRAVSE HGQGIVEERQ
LTPSEQAIEA VLMGLRLAEG ISPPALAARF GFAEDEMIDR RNRESFARMG YLNDTETCLK
VTEQGAPVLE ALLADLVTDT IIAA