Gene Saro_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1857 
Symbol 
ID3917078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1957674 
End bp1958576 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID640444601 
Producthypothetical protein 
Protein accessionYP_497131 
Protein GI87199874 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0328691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGACA GTCACAGATC CGCGCTGATT TTCGCGCTTC TCGGCTTTGC CCTGCTTTCG 
GTCGGCGATG CGGTGGTCAA GAGTATGGCG GGCATGTGGC CGGGAACCGC GATCGGCGCG
CTGCGCTACG TCTTCGGCGC AGTCGGCCTG GGGATCGTAC TGCTGCTTCG CGAAGGGCCT
TCGGGCTTCG CGTTTCCGAA GCCGCGCTGG CAGGTGTTGC GGGGCTTCTG CGTGGCGATG
TCGGCCATGT CGTTCTTCAG CGCCGTGCAC CTGATGCCGA TTGGAGAGGC GACCGCGATT
TCCTTTACGA GCCCGATGAT TACGGCGCTT CTTGCAGCAG TGCTGCTAAA GGAGCCGCTG
CGACGCGAGA CCTGGATCGC CAGCATCGTG GCATTCGGCG GCGTGCTGCT GATCCTGCGC
CCGAACTTCG GCCTGCTGGG CCTTGCAGCG CTGCTGCCCA TGGTCTCCGC GACGGGGATG
GCGCTGCTCA TTATCGCGAA CCGCAAGGTG GCCGGAATGG GGAGCGCGCT TTCGATGCAG
TTCAACGTCG CGCTGATCGG CAGCCTGTTC CTTTGCATCG CCACATTGTC CGGCCATTTC
AGCGGGGTGG CCTTCTTCGC GGTCCAGGTT CCGGCAATGT CCGTGATCGC CAAGTGCGCG
CTCATCGCGG TCAGTGCCAG CACGGCCCAT GCGCTTATCT ACATGGCGAC GACGCGTGCC
GGCGCAGCCA CGATCGCGCC GATGACCTAC GTCCAGCTTC TCATGGCCGG TGTGCTGGGC
TGGGGCCTGT TCGGCGAGCG GCCGGACGGG GTTGCGGCTG CCGGGGCGGT CATCATCGTG
GGCGCGGGGC TCTACCTGTG GAGAGCGGGC CGCGCACCCG AAGAGCCGAC GATGACCGAC
TGA
 
Protein sequence
MQDSHRSALI FALLGFALLS VGDAVVKSMA GMWPGTAIGA LRYVFGAVGL GIVLLLREGP 
SGFAFPKPRW QVLRGFCVAM SAMSFFSAVH LMPIGEATAI SFTSPMITAL LAAVLLKEPL
RRETWIASIV AFGGVLLILR PNFGLLGLAA LLPMVSATGM ALLIIANRKV AGMGSALSMQ
FNVALIGSLF LCIATLSGHF SGVAFFAVQV PAMSVIAKCA LIAVSASTAH ALIYMATTRA
GAATIAPMTY VQLLMAGVLG WGLFGERPDG VAAAGAVIIV GAGLYLWRAG RAPEEPTMTD