| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1836 |
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| Symbol | |
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| ID | 3918396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1934355 |
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| End bp | 1935044 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444578 |
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| Product | pyrimidine 5-nucleotidase |
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| Protein accession | YP_497110 |
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| Protein GI | 87199853 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00207221 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTTTCG ACCCTTCGCG CGTTGACTGC TGGATCTTCG ATCTCGACAA CACGCTCTAT
CCTCCGTCCA CGCGCCTGTT CGACCAGATC GACCAGCGCA TGGGGCTGTT CATCCAGGAA
CTTCTCTGCT GCGACGAGAT GGAAGCCCGC CGCGTGCAGA AGCTCTACTT CCATGATCAT
GGCACCACGC TTTCAGGGCT GATGCACTAC CACGCCACGG ACCCGTACGA GTTCCTTGGC
TTCGTCCACG AGATCGACAT GAGCCCGCTG GCCGCTGCTC CGCGCCTTGC AGATCGGCTG
GCCGCCCTTC CCGGCCGTAA GATCCTCTTC ACCAACGGCG ACGATGCCTA TGCCGCCAGG
GTGCTGGCAG CACTCGATCT TTCGGACAGC TTCGAAGCCA TGTGGGACAT CCACGCGATG
GCCTACAAAC CCAAGCCCGA ACCTTCAGCC TACATCGGCA TGATCGAGGC CCTGGGCATC
ACTCCGGAAA CCTCGGTCTT CGTCGAGGAC ATGGCCCGCA ACCTCGCCCC GGCCAAGGCG
CTCGGAATGC AGACCGTCTG GCTCGACCTC GCCACCGACT GGGGCGATCG CGCCAAGGAC
GATGCCGCGA TCGACGTAGT CACCGACGAC ATCGTCGCCT GGCTCGATCA TACGATTGCG
GCGCTTGCCG ATATGCCCCC GCTGGGCTAG
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| Protein sequence | MPFDPSRVDC WIFDLDNTLY PPSTRLFDQI DQRMGLFIQE LLCCDEMEAR RVQKLYFHDH
GTTLSGLMHY HATDPYEFLG FVHEIDMSPL AAAPRLADRL AALPGRKILF TNGDDAYAAR
VLAALDLSDS FEAMWDIHAM AYKPKPEPSA YIGMIEALGI TPETSVFVED MARNLAPAKA
LGMQTVWLDL ATDWGDRAKD DAAIDVVTDD IVAWLDHTIA ALADMPPLG
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