Gene Saro_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1799 
Symbol 
ID3918358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1896831 
End bp1897664 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content70% 
IMG OID640444540 
Productglutamate racemase 
Protein accessionYP_497073 
Protein GI87199816 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.627391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGAA CGGGCACAGT TGCGAACCAA GCGGCCACGG TCGATCCGGG AGCGCCGCTG 
CTCCTGTTCG ATTCGGGCGT TGGCGGGCTT TCGGTGCTGC GCAAGGTGCG GGCCGTGCTG
CCCGAGGCTC CGGTCATCTA CGTCGCCGAC AACGCCGGCC TTCCCTATGG CGCGAAGACC
GAAGCGCAGA TCGCCGCGCG CGTCTCGGGT CTGCTCGGCC GACTGACGGA ACGGCTGGCG
CCCCGCCTGG TGTGCATCGC CTGCAATACG GCGTCGACCA TTGCCCTGGC ATCGGTCCGC
GAAGTGCTGG AAGTGCCGAT CGTTGGCACC GTTCCGGCGA TCAAGCCTGC CGCCGCGCTT
ACCCGCACCG GCGTCATCGG GCTTCTTGGC ACCGAAGCGA CGATCCGGCA GGCCTATGTC
GACCGGCTCG AGGCGGAGTT CGCCGCCGAC AAGCACCTGC TGCGCCACGG CGCGCCCGAA
CTCGTAGCCG CGGCCGAAGC CAAGCTGCGC GGCGAACGGG TCGATCCGGC CGTCTATGCC
CGGGCCGCAG CGGCCCTGCG CGCGATGCCC GGCGGAGACC GGATCGACAC GGTGGTGCTT
GCCTGTACGC ACTTCCCGCT GGTCGAGGAC GAATTGCGCG AAGCCTTCGG GCCGGAAGTC
CGGTTCGTCG ACGGATCGGA CGGCATTGCC CGCCGCATCG CCCACCTCAC GCAGGGACAG
GCCTGGCGCA GGACGGAACC CGACCTCGCG CTGTTCACGC GCGGCGGCGA GGACGTCGAC
CGGCTCGGCC CCGCGCTTGC AGCGCACGGG CTTGGCCGCA TCGGGATATT CTGA
 
Protein sequence
MTGTGTVANQ AATVDPGAPL LLFDSGVGGL SVLRKVRAVL PEAPVIYVAD NAGLPYGAKT 
EAQIAARVSG LLGRLTERLA PRLVCIACNT ASTIALASVR EVLEVPIVGT VPAIKPAAAL
TRTGVIGLLG TEATIRQAYV DRLEAEFAAD KHLLRHGAPE LVAAAEAKLR GERVDPAVYA
RAAAALRAMP GGDRIDTVVL ACTHFPLVED ELREAFGPEV RFVDGSDGIA RRIAHLTQGQ
AWRRTEPDLA LFTRGGEDVD RLGPALAAHG LGRIGIF