Gene Saro_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1794 
Symbol 
ID3918353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1891915 
End bp1893120 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content64% 
IMG OID640444535 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_497068 
Protein GI87199811 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACATCC ATCCTGACGC ACTGGCTGTA GTTCGCGCCT CGGCGCCGGA CCAACCCGCC 
ATTCTCAATC GCCCGCACGC CGCTGCGCGC GCTGCCCGCT TCTTTGTGGA GAAGTTTCCG
GGCAAGTCGC TCTATGCGGT GAAGGCCAAT CCTTCGGCCG ATCTGCTGCG CGTCCTTTGG
GATTCGGGCG TGACTCACTA CGATGTTGCG TCGATCGCGG AAGTGCGCCT CGTGCGCGCG
ACGCTGCCGG AAGCGACGCT TTGCTTCATG CACCCGGTAA AGGCGCCCGC CGCCATCCGC
GAAGCCTACG AACAGCACGG CGTGCGCGTG TTCAGCCTCG ATTCCTTCGA GGAACTGGAA
AAGATCAAGG AAGCCTGCGG CTTTGCCGAG GACCTGACGC TTTGCGTGCG CCTGCGCGTC
TCTTCCGATT ATTCGGAACT CAGCCTTGCA TCCAAGTTCG GTTGCGATCT GACCAATGCC
GCGGAACTGC TCCAGGCAAC GCGTCAGGCT GCGGATTCTC TCGGCGTCTG CTTCCACGTC
GGCAGCCAGT CGATGAGCCC GCATGCCTAT GTCCAGGCGC TGGAGCGCGT GCGCGCGGCC
ATCGTCGACG CGTCGGTCAC GGTCGACATC ATCGATGTTG GCGGCGGCTT TCCGTCGATC
TATCCGGGCA TGGAACCGCC CCCGCTCGAA GATTACTTCG GCGTGATCGA CCGCACCTAT
GAATCGTTGC CGATTTCCTA CTCGGCGGAA CTGTGGTGCG AACCGGGCCG TGCGCTCTGC
GCCGAATACA ACTCGATGAT CGTGCGGGTC GAGCGCCGTC GCGGCGCGGA GCTCTACATC
AACGACGGCG CCTATGGCGC GCTGTTCGAT GCCGCCCACG TCGGTTGGCG CTTCCCCGTT
CGCGTCCTGC GCGAAGAGGT GGCGAACGAC GGCGTGGAAA TCGAGATGGA GCCCTTCAGC
TTCTACGGCC CGACCTGCGA CGACATGGAC CACATGGAAG GTCCGTTCGA GCTTCCGGCC
GACATGAAGG TGGGCGACTA CATCGAGATC GGCATGCTTG GCGCTTATGG CGCGGCTATG
AAGACCGCGT TCAACGGCTT CGGCGCAACC GAGGTCTTCG AAGTCTCCGA CGAACCGATG
GCGAGCCAGT ATCGCGGCGA CCGTCGCGAC CCTCGCGTGT CGGACAACGT CGTCTCGCTG
CGCTGA
 
Protein sequence
MHIHPDALAV VRASAPDQPA ILNRPHAAAR AARFFVEKFP GKSLYAVKAN PSADLLRVLW 
DSGVTHYDVA SIAEVRLVRA TLPEATLCFM HPVKAPAAIR EAYEQHGVRV FSLDSFEELE
KIKEACGFAE DLTLCVRLRV SSDYSELSLA SKFGCDLTNA AELLQATRQA ADSLGVCFHV
GSQSMSPHAY VQALERVRAA IVDASVTVDI IDVGGGFPSI YPGMEPPPLE DYFGVIDRTY
ESLPISYSAE LWCEPGRALC AEYNSMIVRV ERRRGAELYI NDGAYGALFD AAHVGWRFPV
RVLREEVAND GVEIEMEPFS FYGPTCDDMD HMEGPFELPA DMKVGDYIEI GMLGAYGAAM
KTAFNGFGAT EVFEVSDEPM ASQYRGDRRD PRVSDNVVSL R