| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1746 |
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| Symbol | sdhA |
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| ID | 3916321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1839579 |
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| End bp | 1841393 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444487 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_497020 |
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| Protein GI | 87199763 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.721199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCGA CTCAGCCTGC CTACAAGATC ATCGACCACA CCTACGACAC CGTCGTCGTG
GGCGCGGGCG GTTCGGGCCT GCGCGCGACC ATGGGTTCGG CCCAGGCCGG CCTGCGCACC
GCCTGCATCA CCAAGGTCTT CCCGACCCGT TCGCACACCG TGGCGGCACA GGGTGGCATC
GCCGCCAGCC TCGGCAACAA TTCGCCGGAC CACTGGACCT GGCACATGTA CGACACCGTC
AAGGGGTCTG ACTGGCTGGG CGACCAGGAT GCCATCGAAT ACATGGTGCG CGAGGCTCCG
GCCGCGGTCT ACGAACTGGA ACACGCGGGT GTCCCGTTCA GCCGCAACCC CGAAGGCACG
ATCTACCAGC GTCCGTTCGG CGGTCACATG CAGAACATGG GTGAAGGCCC GCCGGTTCAG
CGCACCTGCG CCGCCGCCGA CCGTACCGGC CACGCCATGC TTCACGCGCT GTACCAGCAG
AGCCTGAAGT ACGACGCCGA CTTCTTCATC GAATACTTCG CGATCGACCT GATCATGGAG
AACGGTGAAT GCCGCGGCGT GATCGCGCTG TGCATGGACG ACGGCTCGAT CCACCGCTTC
CGCAGCCATG CGGTCGTGCT GGCGACCGGC GGCTATGGCC GTTCGTACTT CACCGCGACG
TCGGCCCATA CCTGCACCGG CGACGGCGGC GGCATGGTGC TGCGCGCGGG CCTGCCGCTG
CAGGACATGG AATTCGTGCA GTTCCACCCG ACCGGCATCT ACGGCGCGGG CGTGCTCATC
ACCGAAGGCG CGCGTGGTGA GGGCGGCTAC CTGACGAACT CCGAGGGCGA GCGTTTCATG
GAGCGCTATG CCCCGTCGGC CAAGGACCTT GCGTCGCGCG ACGTCGTGTC GCGTTCGATG
GCGATGGAAA TCCGCGAGGG TCGCGGCGTC GGTCCGCACA AGGACCACAT CTACCTGCAC
CTCGACCACA TCGACCAGAA GGTGCTGGCA GAGCGTCTGC CCGGCATCAC CGAAAGCGGC
AAGATCTTCG CGGGTGTCGA TCTTACCCGC CAGCCGCTGC CGGTCGTGCC GACCGTGCAC
TACAACATGG GCGGCATCCC GACGAACTAT CACGGCGAAG TCGTCACCAT CGGCGCCGAC
GGCAACCCCG AGACGATCGT CCCGGGTCTG TTCGCGGTAG GCGAAGCGGC CTGCGTTTCG
GTCCACGGCG CGAACCGCCT TGGCTCGAAC TCGCTGATCG ACCTTGTCGT GTTCGGCCGT
GCCACGGGCC TGCGCCTCAA GGAACTGATC AAGCCGGGCA CCGCGCACAA CTCGCTGCCC
AAGGACAGCG CCGACCTCGC GCTGACCCGC CTCGATCACT TCCGCCATGC CAAGGGCGGT
TCGCCCACCG CCGAAGTGCG CATCGAAATG CAGCGCACGA TGTCGGCCCA CGCGGCGGTG
TTCCGCACCG ACGAACTGAT GGCGGAAGGC AAGGTCAAGC TGGCCGATAC CTACAAGCGC
ATGGAAGACA TCCACGTGTC CGACCGTTCG CTGATCTGGA ACTCGGACCT TGTCGAAACG
CTCGAACTGG ACAACCTGAT CAGCCAGGCG ACCGTGACGA TGCATTCCGC GCATAACCGC
AAGGAAAGCC GCGGTGCCCA CGCGCACGAG GATTTCCCCG ATCGCAACGA CGCCGAGTGG
ATGAAGCACA CCGCCACCTG GTTCAACGGA TGGGGCGGCA AGGGTGGCGA AGTCCGCATC
GACTATCGCC CGGTCCACGA ATACACGCTG ACCGACGACG TCGAGTACAT CAAGCCGAAG
AAGCGCGTGT ACTGA
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| Protein sequence | MTSTQPAYKI IDHTYDTVVV GAGGSGLRAT MGSAQAGLRT ACITKVFPTR SHTVAAQGGI
AASLGNNSPD HWTWHMYDTV KGSDWLGDQD AIEYMVREAP AAVYELEHAG VPFSRNPEGT
IYQRPFGGHM QNMGEGPPVQ RTCAAADRTG HAMLHALYQQ SLKYDADFFI EYFAIDLIME
NGECRGVIAL CMDDGSIHRF RSHAVVLATG GYGRSYFTAT SAHTCTGDGG GMVLRAGLPL
QDMEFVQFHP TGIYGAGVLI TEGARGEGGY LTNSEGERFM ERYAPSAKDL ASRDVVSRSM
AMEIREGRGV GPHKDHIYLH LDHIDQKVLA ERLPGITESG KIFAGVDLTR QPLPVVPTVH
YNMGGIPTNY HGEVVTIGAD GNPETIVPGL FAVGEAACVS VHGANRLGSN SLIDLVVFGR
ATGLRLKELI KPGTAHNSLP KDSADLALTR LDHFRHAKGG SPTAEVRIEM QRTMSAHAAV
FRTDELMAEG KVKLADTYKR MEDIHVSDRS LIWNSDLVET LELDNLISQA TVTMHSAHNR
KESRGAHAHE DFPDRNDAEW MKHTATWFNG WGGKGGEVRI DYRPVHEYTL TDDVEYIKPK
KRVY
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