Gene Saro_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1718 
Symbol 
ID3916293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1805578 
End bp1807137 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content65% 
IMG OID640444459 
Productpyridine nucleotide-disulphide oxidoreductase, class-II, active site 
Protein accessionYP_496992 
Protein GI87199735 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR03140] alkyl hydroperoxide reductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTTC TCGACGCCGC CACCACTGCC CAGCTCAAGG CCTATCTAGG CAACCTGCGC 
CGTCCGATCG AACTGGTCGC AACGCTCGAC GACAGCCCGA AGTCGGCCGA AATGCGCAGC
CTCGTCGAGG AAATCGTCGC GCAGTCGGAC AAGGTTTCGG CTCGTTTCGA CGGCACCGGC
GAGCGCGTGC CGAGTTTTGC CATCCGCGCG GACGAGGGCA GGGCGCAGGC CGTGTTCGCG
GGCCTTCCGA TGGGCCACGA ATTCACTTCC CTGATCCTTG CGCTGCTCCA TGTCGGCGGA
CACCCGCCCA AGGAAGACGC CGACCTGCTC GACCAGGTGC GCGGCCTCGA AGGTCCGCTG
CACTTCGAGA CGTTCTTCTC GCTCACCTGC CAGAACTGCC CTGACGTGGT GCAGGCGCTG
AACATCATGG CGGCGCTCAA TCCGAACGTC AGCCACGTCG CCATCGACGG CGCGCTGTTC
AAGGATGAGG TCGAGCGGCG CCAGATCATG GCCGTGCCGA CCGTTTACCT CAACGGCGAA
CTGTTCGGTT CGGGCCGCAT GGACCTCGCC CAGATCGTGG CGAAGCTGGA CACCAACGCC
TCTGCCCGCG CTGCCGAGAA GATCGCGGCA AAGGAGCCTT TCGACGTGCT TGTCGTCGGC
GGCGGTCCCG CAGGCGCGGC GGCTGCGATC TATGCCGCGC GCAAGGGCAT CCGCACTGGC
GTCGTGGCCG AACGTTTCGG TGGCCAGGTG CTCGACACCA TGGGCATCGA GAACTTCATC
TCCATCCAGC ATACCGAAGG GCCGAAGCTG GCGGCGCAAC TGGAACAGCA CGTCAAGGAA
TACGACGTCG ACGTGATGAA CCTCCAGCGC GCGACCGGGC TGGTGCCGGC GGGCGATGAC
GGCCTGCACG AAGTGAAGCT GGAGAACGGG GCAAGCCTCA AGGCGAAGAC GCTGATCCTG
TCGACCGGCG CGCGCTGGAG GCAGATGGGC GTTCCCGGCG AGGACGAGTA TCGCAACAAG
GGTGTCGCCT ATTGCCCGCA CTGCGACGGA CCGTTGTTCA AGGGCAAGCG GACGGCTGTG
ATCGGTGGCG GCAACTCTGG CGTGGAAGCC GCGATCGACC TTGCCGGCAT CGTCGCCCAT
GTCACGCTGA TCGAGTTCGA CAACCAGCTT CGCGCCGACG CCGTGCTCCA GACCAAGCTG
CGCTCGCTGC CCAACGTCAC CATCGTCACG TCGGCGCTCA CAACCGAAGT CCTCGGTGAC
GGGGCGAAGG TGACGGGCCT CGTCTACAAG GACCGCGAGA CCGGCCAGAC GCACACGGTC
GAACTGGAAG GCATCTTCGT GCAGATCGGC CTCGTGCCCA ACACCGAATG GCTCAAGGGC
GCGATCGATC TCAGCCCGCG CGGCGAGATC GAGGTCGATG CGCGCGGCGC GACCAGTGTG
CCCGGCGTAT TCGGCGCGGG CGATGCGACG ACTGTGCCGT ACAAGCAGAT CGTCATCGCG
ATGGGCGAGG GTTCGAAGGC TGCGCTGTCC GCATTCGATT ACCTTATCCG ACAGGGTTGA
 
Protein sequence
MPVLDAATTA QLKAYLGNLR RPIELVATLD DSPKSAEMRS LVEEIVAQSD KVSARFDGTG 
ERVPSFAIRA DEGRAQAVFA GLPMGHEFTS LILALLHVGG HPPKEDADLL DQVRGLEGPL
HFETFFSLTC QNCPDVVQAL NIMAALNPNV SHVAIDGALF KDEVERRQIM AVPTVYLNGE
LFGSGRMDLA QIVAKLDTNA SARAAEKIAA KEPFDVLVVG GGPAGAAAAI YAARKGIRTG
VVAERFGGQV LDTMGIENFI SIQHTEGPKL AAQLEQHVKE YDVDVMNLQR ATGLVPAGDD
GLHEVKLENG ASLKAKTLIL STGARWRQMG VPGEDEYRNK GVAYCPHCDG PLFKGKRTAV
IGGGNSGVEA AIDLAGIVAH VTLIEFDNQL RADAVLQTKL RSLPNVTIVT SALTTEVLGD
GAKVTGLVYK DRETGQTHTV ELEGIFVQIG LVPNTEWLKG AIDLSPRGEI EVDARGATSV
PGVFGAGDAT TVPYKQIVIA MGEGSKAALS AFDYLIRQG