Gene Saro_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1684 
Symbol 
ID3916259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1768599 
End bp1769282 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content61% 
IMG OID640444425 
ProductTetR family transcriptional regulator 
Protein accessionYP_496958 
Protein GI87199701 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAA AGGAAGATGC GCCAAAATTC GTGACCGACA TGATCATGCC GGAACGCGAA 
GGGGGGTATC TGAAGGGTCA CGAGACCCGA GAGCTGATCC TGCGTACCGC CCTCACCATC 
CTGATCGAGG AAGGTTACCG GGCCATGTCG ATGCGCCGAG TCGCGGCGGC CTGCGACTTG 
AAATTCGGCA ACCTTACCTA CCACTATCGC AGCCGCGAGG ACCTGGTCCG GGCGATGATG 
GACGCGGTGA TCCGCAGCTA CGAGATCGAG TTCGAGGACA TCATGCACAT GCCCGGGGTC 
CCGCCCGAAG AGCGCCTGCG CCGCATGTGC ATGCTGATCC TCGACGACAT CCGCTCGAAG 
AAGACCACCC GCTTCTTCCC CGAGCTGTGG GCGCTGTCCA ATCACGATCC ATTCGTGCTC 
GAACGCATTC AGGATCTCTA TGTCCGCGCC CGCGCGCCGC TTCTGGAGAT CATCACCGAG 
ATGCGGCCCG ACCTGCCACC GATGGACCGC GAGACGGTGT CACTGTTCAT ATCGGGCTCG 
ATGGAGGGAA TGACCATCTT CGCGGGCCAC GAAAAGCCGT TCGAACCGCG CATGCCGCAG 
ATCGAGCGAG TGGCGGTCCA TGCCTTCTGC AACCTGGTGA AGACGATCAC TTCCGAACAG 
ATCAGGGGGT TGGCAACCGC CTGA
 
Protein sequence
MYQKEDAPKF VTDMIMPERE GGYLKGHETR ELILRTALTI LIEEGYRAMS MRRVAAACDL 
KFGNLTYHYR SREDLVRAMM DAVIRSYEIE FEDIMHMPGV PPEERLRRMC MLILDDIRSK 
KTTRFFPELW ALSNHDPFVL ERIQDLYVRA RAPLLEIITE MRPDLPPMDR ETVSLFISGS 
MEGMTIFAGH EKPFEPRMPQ IERVAVHAFC NLVKTITSEQ IRGLATA