Gene Saro_1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1599 
Symbol 
ID3918707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1662598 
End bp1663284 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID640444339 
Producttwo component transcriptional regulator 
Protein accessionYP_496873 
Protein GI87199616 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.118902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA AGATCCTGCT TGTTGAAGAC GATGCCGACA CCGCCGCGTT CATCGTCGGC 
GGCCTGGCCG AGGAGGGCTT CGTGGTCGAT CGCGCCCGCG ATGGGCGAGA GGGTCTGTTC
ATGGGTACGG ACCACACATA TCAGTGCATC GTGCTCGACC GGATGTTGCC GGGGTTGGAC
GGCATGGCGG TTCTGGCAGC GCTGCGCGGT GCCGGGGTGC ACACGCCGGT CATCATCCTT
TCGGCCCTTG GTGCGACGGA AGATCGGATC ACGGGCCTGA CCCGGGGGGC GGACGACTAT
CTGGCCAAGC CCTTTGCCTT TGCGGAACTG CTGGCGCGTA TCCGGCTTCT GGTCCGGAGG
GGCAGCGGGG CGCCGACCGA ACAGACCAAG CTGTCCTGCG GCGACCTTGA AATGGACCTG
CTTTCGCGCC GCGTTCGACG CGGGGCGCGG GCAATCGACC TCCAGCCGCG CGAATTCCGC
CTGCTCGAGT TCCTGCTGCG CCATGCAGAT CAGGTCGTGA CCCGAACGAT GCTTCTGGAA
GGCGTCTGGG ACTATCACTT CGATCCAGGC ACCAACGTGA TCGACGTCCA CATCAGTCGC
CTGCGCAAGA AGATCGACGA GGGCGAGGTC GTCGCCTTGC TTCACACCGT GCGGGGCGCC
GGTTACCGCA TCGGCACAGG TGCGTGA
 
Protein sequence
MSQKILLVED DADTAAFIVG GLAEEGFVVD RARDGREGLF MGTDHTYQCI VLDRMLPGLD 
GMAVLAALRG AGVHTPVIIL SALGATEDRI TGLTRGADDY LAKPFAFAEL LARIRLLVRR
GSGAPTEQTK LSCGDLEMDL LSRRVRRGAR AIDLQPREFR LLEFLLRHAD QVVTRTMLLE
GVWDYHFDPG TNVIDVHISR LRKKIDEGEV VALLHTVRGA GYRIGTGA