Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1599 |
Symbol | |
ID | 3918707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1662598 |
End bp | 1663284 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640444339 |
Product | two component transcriptional regulator |
Protein accession | YP_496873 |
Protein GI | 87199616 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.118902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCAGA AGATCCTGCT TGTTGAAGAC GATGCCGACA CCGCCGCGTT CATCGTCGGC GGCCTGGCCG AGGAGGGCTT CGTGGTCGAT CGCGCCCGCG ATGGGCGAGA GGGTCTGTTC ATGGGTACGG ACCACACATA TCAGTGCATC GTGCTCGACC GGATGTTGCC GGGGTTGGAC GGCATGGCGG TTCTGGCAGC GCTGCGCGGT GCCGGGGTGC ACACGCCGGT CATCATCCTT TCGGCCCTTG GTGCGACGGA AGATCGGATC ACGGGCCTGA CCCGGGGGGC GGACGACTAT CTGGCCAAGC CCTTTGCCTT TGCGGAACTG CTGGCGCGTA TCCGGCTTCT GGTCCGGAGG GGCAGCGGGG CGCCGACCGA ACAGACCAAG CTGTCCTGCG GCGACCTTGA AATGGACCTG CTTTCGCGCC GCGTTCGACG CGGGGCGCGG GCAATCGACC TCCAGCCGCG CGAATTCCGC CTGCTCGAGT TCCTGCTGCG CCATGCAGAT CAGGTCGTGA CCCGAACGAT GCTTCTGGAA GGCGTCTGGG ACTATCACTT CGATCCAGGC ACCAACGTGA TCGACGTCCA CATCAGTCGC CTGCGCAAGA AGATCGACGA GGGCGAGGTC GTCGCCTTGC TTCACACCGT GCGGGGCGCC GGTTACCGCA TCGGCACAGG TGCGTGA
|
Protein sequence | MSQKILLVED DADTAAFIVG GLAEEGFVVD RARDGREGLF MGTDHTYQCI VLDRMLPGLD GMAVLAALRG AGVHTPVIIL SALGATEDRI TGLTRGADDY LAKPFAFAEL LARIRLLVRR GSGAPTEQTK LSCGDLEMDL LSRRVRRGAR AIDLQPREFR LLEFLLRHAD QVVTRTMLLE GVWDYHFDPG TNVIDVHISR LRKKIDEGEV VALLHTVRGA GYRIGTGA
|
| |