Gene Saro_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1582 
Symbol 
ID3917257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1638340 
End bp1639614 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content64% 
IMG OID640444322 
ProductGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_496856 
Protein GI87199599 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.482079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGG ATATTGTAGC ACGCGCTCGT CAGCTCATCG AAGACCGGAT CATCTCGCGG 
GCCGCGCTGG CGCGTGCCGC CGGGCTGCAT CCCAATACGT TGCGCGATGC GCTTTCGCCC 
GACTGGAACC CCACCGTCGA TACGCTGACC AAGCTGGAGC GGGCAATGGA CGATAGCGAG 
GACGACGACT TCGCCCTCGC CTCGGTCGAA GAAATCATCG CCGAAGTCCG CAACGGCCGC 
ATGGTGGTGC TGGTCGACGA CGAGGACCGC GAGAACGAGG GCGATCTGCT TATTCCGGCA 
CAAATGGCCA CGCCCGAGAC GATCAACTTC ATGGCAACGC ACGGTCGTGG CCTCATCTGT 
CTGTGCCTTA CCAGCGACCG CGCCAGCAAT CTTGGCCTCG AACTGATGAG CCGGCATAAC 
GGCACCCGTC ATGGAACAGC CTTCACTGTA TCCATCGAGG CCCGCGAGGG TGTCGATACC 
GGCATTTCCG CCGCAGACCG CGCCCGCACC ATTGCCGTTG CCGTCGATGC GACGAAGACC 
CGCGACGATC TGGTGACGCC CGGCCACGTC TTCCCGCTGA TCGCACGTGA CGGCGGCGTC 
TTGGTCCGCG CCGGACACAC CGAGGCAGCA GTCGACCTTC CGCGCCTTGC CGGCCTCAAT 
CCCTCGGGCG TGATCTGCGA GATCATGAAC GACGATGGCA CCATGGCGCG CCTCGACGAT 
CTCATTCCCT TCGCCCGCAA GCATGGCCTG AAGATCGGCA CGATCCGCGA CCTGATTGAA 
TATCGCCGCC GCCACGACCA CCTTGTCGAA TGCGCGAACC AGGCTCCGTT CCACACCGAT 
TACGGCGGCG AATGGACGAT CAAGACCTAT CGCAACAAGG TGGACGGATC GGCCCACCTC 
GTGCTCCAGA AGGGCGCGGT CGTGCCGGGC AAGCCCACGC TAGTGCGCAT GCATGCGATC 
TCGGTCCTGT CCGATGTTCT CGGCCAGCCG GGACCGCGCA AGCGCATCCT GCAGCGCGCC 
ATGACCGCGA TCGGCGAGGC AGGCTCCGGG GTGATCGTGC TGCTCATGCC GACCGACCCG 
CAGCAACTGA TGAACGAAGT TGCCGGAACG GCCGGACACG ACATGGAACT GCGCAGCTAT 
GGCATCGGCG CGCAGATCCT TGCCGATCTG GGCGTGCATG ACATGGTCCT GCTAACCAAT 
TCGCACCACA ACCTTGTTGC GCTCGAAGGC TACGGGCTGA GCATCGTCGG CGAACAGGCC 
ATTCCGGAGG CCTGA
 
Protein sequence
MAQDIVARAR QLIEDRIISR AALARAAGLH PNTLRDALSP DWNPTVDTLT KLERAMDDSE 
DDDFALASVE EIIAEVRNGR MVVLVDDEDR ENEGDLLIPA QMATPETINF MATHGRGLIC 
LCLTSDRASN LGLELMSRHN GTRHGTAFTV SIEAREGVDT GISAADRART IAVAVDATKT 
RDDLVTPGHV FPLIARDGGV LVRAGHTEAA VDLPRLAGLN PSGVICEIMN DDGTMARLDD 
LIPFARKHGL KIGTIRDLIE YRRRHDHLVE CANQAPFHTD YGGEWTIKTY RNKVDGSAHL 
VLQKGAVVPG KPTLVRMHAI SVLSDVLGQP GPRKRILQRA MTAIGEAGSG VIVLLMPTDP 
QQLMNEVAGT AGHDMELRSY GIGAQILADL GVHDMVLLTN SHHNLVALEG YGLSIVGEQA 
IPEA