| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1561 |
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| Symbol | |
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| ID | 3917236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1618665 |
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| End bp | 1620215 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640444301 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_496835 |
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| Protein GI | 87199578 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.636243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGCGA AACAAAGGGA AGGGCGTGCG CGCCTCGTTC TGGTGACCGG CGCGGCCCGC
GGCATCGGTC TGGCGTGTGC CCACCGCTTT GCCAGGGCCG GTGATCGCGT GGTCATGGCC
GACCGCGACT TGGCGGCGTG CACTTTCGAG GCTGAAAGGC TCGGCTCGCG GCATGTCGCG
CTGCAACTGG ACGTTTCGGA CGAAGCGGCG GTCGAGCACG CGATGGACGG TCTTCTGCAG
CAGTTCGGCG CGTTCGATGT CGTGATCAAC AACGCCGGGG TGGTGGATCG CTTTGCCCGG
CCGCTTCTTG ACGTACCGCC GGAGGATATC GACCGGCTGA TAGGCGTCAA TCTCGAAGGT
CCCTATCTGG TTGTGCGCGC TGCGCTGCGG ACGATCCTTG CCGGACGGCG TGGCGCGGCA
ATCGTCAACG TCGCATCGGG CGCGGCACTG CGCGCGCTGC CGGGCCGTGC CGCCTACAGC
ATGACAAAGG CGGGCGTCAT CGGCATGACC CGCGCGATGG CGATAGAGCT TGGCCCCCAG
GGTATCGCCG TCAACGCCGT GCTGCCGGGA TACATCGACA CCGAAATTCT CCTTGCTCTG
GAGCGGGAGG GCAAGTTCGA CCGCGCCGCC GCTGCCGGCG CAATACCGAT GGGAAGGCTC
GGCCGGACAG ATGAGATTGC CGAGGCGGTC CATTACCTCG CGCGCGGGGG TTATCATTGC
GGCAGCCTGC TTTCGGTCGA TGGTGGGGTC GATGCGTATG GCGGTTCGGG CAAGGCCTCC
ACCGCCGTCA TGCCGCACCG CCCGGTGCGC GCGGGCGACG TCGCTTGCGT GACCGGCGGG
GCGAGCGGCA TCGGCGCCGT TGTGGCAGAC CGGCTTGCCG GGCTCGGCTG GCTCGTGGCG
ATAATCGACA GCCGGGAAAT CGCGGACGGA CCACACCCTG CGTGGCAGGC CGACATCGCC
AGCGAAGCCT CGGTCGAGAG CGCGATGGCA GGCATCGCTG GCCAGCTCGG CCCGGTGACG
CTGCTGGTCA ACAATGCCGG TATCGTCGAA CCCATGGCGA AGTCTGCCGA CCAGGCGCTT
GCCGACTTCC GCCGCACGAT CGACGTGAAC GTGAAGGGCA CTATCCATGC ATCGCGCGCG
GCTGCGCGGC AGATGATCGG CGCGGGCGGT GGGGCCATTG TCAATCTTTC CTCCATCACG
GCATCGCTCG GTTTGCCGGG GCGCAATGCC TATTGCGCGT CGAAATCTGC CGTCACCATG
CTCACCCGCA GTCTCGCCTG CGAATGGGCC GCGCATGGCA TCCGGGTGAA TGCGGTCGCG
CCAGGATACA TCCTGACCCC CGCAGTGCAG GCCTTGCTGG CTTCGGGAGA GCGCGACATG
AACTCCGTCG TCCGGCGCAT ACCGGTGGCG CGCCTTGGTC AGCCTGACGA AGTGGCGGAC
GCCATCGCGT TTCTGGCCTC GGATGCGGCA TCCTATGTTA CCGGCGCCAC GCTTCAGGTG
GATGGCGGCT ATCTTGCCAG CGGGCATCCG CCCGATGGAC CGATGCCCTG A
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| Protein sequence | MEAKQREGRA RLVLVTGAAR GIGLACAHRF ARAGDRVVMA DRDLAACTFE AERLGSRHVA
LQLDVSDEAA VEHAMDGLLQ QFGAFDVVIN NAGVVDRFAR PLLDVPPEDI DRLIGVNLEG
PYLVVRAALR TILAGRRGAA IVNVASGAAL RALPGRAAYS MTKAGVIGMT RAMAIELGPQ
GIAVNAVLPG YIDTEILLAL EREGKFDRAA AAGAIPMGRL GRTDEIAEAV HYLARGGYHC
GSLLSVDGGV DAYGGSGKAS TAVMPHRPVR AGDVACVTGG ASGIGAVVAD RLAGLGWLVA
IIDSREIADG PHPAWQADIA SEASVESAMA GIAGQLGPVT LLVNNAGIVE PMAKSADQAL
ADFRRTIDVN VKGTIHASRA AARQMIGAGG GAIVNLSSIT ASLGLPGRNA YCASKSAVTM
LTRSLACEWA AHGIRVNAVA PGYILTPAVQ ALLASGERDM NSVVRRIPVA RLGQPDEVAD
AIAFLASDAA SYVTGATLQV DGGYLASGHP PDGPMP
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