Gene Saro_1481 details

Gene Information

• Locus tag: Saro_1481
• ID: 3916146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1523603
• End bp: 1524319
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640444224
• Product: transposase
• Protein accession: YP_496758
• Protein GI: 87199501
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3316] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.84376
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGTG CCTGCAAATC AGCCAACCCG TTCAGGTATT TCAACTCCTC GCCGGAGATC 
ATTCGGCTGG CGGTGCTGAT GTATGTCCGT TTTCCGCTGT CCCTGCGCAA CGTCGAGGAC 
TTGCTCGCTG AGCGCGGCAT CGACATCTGC CACGAGACGG TTAGGCTGTG GTGGAACCGG 
TTCGGACCGA TGTTCGCGTC AGAGATCCGG CGCCAGCGTG TCAGTCGGAT GCGTGGATTT 
CGTCAGTGGC GCTGGCACCT TGATGAAGTG TTCGTCAAGA TCAACGGCGA GCGCCATTAC 
CTGTGGCGGG CGGTGGATCA CGAGGGAGAG GTACTCGAGA GCTACGTTAC CAAAACCCGC 
GACAAGGCTG CGGCTCTGAC TTTCCTGAAG AAGGCATTGA AGCGGCACGG TCGGGCCGAA 
GCAATCGTGA CCGATGGCCT TCGGTCATAC CCGGCCGCGA TGCGCCAACT CGGCAATCTT 
GATCGCCGGA AAATGGGGCG ATGGCTAAAC AATCGGGTGG AGAACAGCCA CCTGCCATTT 
CGCCGACGAG AACGGGCGAT GCTGCGTTTC AGGCAGATGA AGACGTTGCA GAAGTTCGCC 
TCCGTCCATG GCTCGCTCCA TAACCATTTT TCCCAGGACC GTCACCTCAT CGATCGCAAG 
ACCTACAAGC AGCGTCGCTC GGCAGCCCTT GCCGAGTGGC AGACGCTCAT GGCCTGA 

 

Protein sequence

MSRACKSANP FRYFNSSPEI IRLAVLMYVR FPLSLRNVED LLAERGIDIC HETVRLWWNR 
FGPMFASEIR RQRVSRMRGF RQWRWHLDEV FVKINGERHY LWRAVDHEGE VLESYVTKTR 
DKAAALTFLK KALKRHGRAE AIVTDGLRSY PAAMRQLGNL DRRKMGRWLN NRVENSHLPF 
RRRERAMLRF RQMKTLQKFA SVHGSLHNHF SQDRHLIDRK TYKQRRSAAL AEWQTLMA