Gene Saro_1444 details

Gene Information

• Locus tag: Saro_1444
• Symbol: smpB
• ID: 3916108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1488542
• End bp: 1489024
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640444187
• Product: SsrA-binding protein
• Protein accession: YP_496722
• Protein GI: 87199465
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGTC CCGTTCATCC CGAATTCGAC AAGAAGAAGG TCGTCGCCGA AAATCGGCGG 
GCACGCTTCG AGTATTTCAT CGAAGAGACC TACGAGGCTG GAATCTGCCT GACCGGCACC 
GAGGTGAAGT CGCTTCGCTT CGGGGAAGGT TCGATCGCCG AGAGTTATGC CGAGGTGAAG 
AACGGCGAAG TCTGGTTGGT CAATTCCAAC GTTCCCGAAT TCAGCCACGG CAATCGTTTC 
AATCACGTGC CGAAGCGTCC GCGCAAGCTA TTGCTGAAAG AGCGCCAGAT CGCGAAGTTT 
ACCGGAGCCG TGGAGCGCAA GGGCATGACG CTCGTGCCCC TGTCGATCTA CTTCAACAGC 
CGCGGCCGTG CGAAGGTCGA ACTGGCGCTC GCGAAGGGCA AGAACGCTGC CGACAAACGC 
ACGACGATCA AGGAACGCGA TTGGAAGCGC GAAAAGGCGC GGATCATGAA GGACCACGGT 
TGA 

 

Protein sequence

MARPVHPEFD KKKVVAENRR ARFEYFIEET YEAGICLTGT EVKSLRFGEG SIAESYAEVK 
NGEVWLVNSN VPEFSHGNRF NHVPKRPRKL LLKERQIAKF TGAVERKGMT LVPLSIYFNS 
RGRAKVELAL AKGKNAADKR TTIKERDWKR EKARIMKDHG